Table 1. Phenotyping growth conditions.
Summary of the eighteen competitive fitness phenotypes we analyze in this study. All assays were conducted at 30 °C, except when stated otherwise. YP: 1% yeast extract, 2% peptone. YPD: 1% yeast extract, 2% peptone, 2% glucose. SD: synthetic defined medium, 2% glucose. YNB: yeast nitrogen base, 2% glucose. Numbers of inferred additive QTL and epistatic interactions are also shown.
| Name | Description | Additive QTL | Epistatic QTL |
|---|---|---|---|
| 23 C | YPD, 23 °C | 112 | 185 |
| 25 C | YPD, 25 °C | 134 | 189 |
| 27 C | YPD, 27 °C | 149 | 255 |
| 30 C | YPD, 30 °C | 159 | 247 |
| 33 C | YPD, 33 °C | 147 | 216 |
| 35 C | YPD, 35 °C | 117 | 250 |
| 37 C | YPD, 37 °C | 128 | 265 |
| sds | YPD, 0.005% (w/v) SDS | 175 | 263 |
| raff | YP, 2% (w/v) raffinose | 167 | 221 |
| mann | YP, 2% (w/v) mannose | 169 | 341 |
| cu | YPD, 1 mM copper(II) sulfate | 143 | 225 |
| eth | YPD, 5% (v/v) ethanol | 149 | 247 |
| suloc | YPD, 50 µM suloctidil | 173 | 314 |
| 4NQO | SD, 0.05 µg/ml 4-nitroquinoline 1-oxide | 153 | 394 |
| ynb | YNB, w/o AAs, w/ ammonium sulfate | 145 | 303 |
| mol | molasses, diluted to 20% (w/v) sugars | 111 | 235 |
| gu | YPD, 6 mM guanidinium chloride | 185 | 277 |
| li | YPD, 20 mM lithium acetate | 83 | 42 |