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. 2022 Mar 21;18(3):e1009969. doi: 10.1371/journal.pcbi.1009969

Table 1. Each parameter varied in the RD model to reproduce in vitro experimental kinetics, along with the optimal values we found.

Other energies, geometries, and concentrations were fixed by experimental data.

Parameters Explanations Optimal values
ρ AP AP-2 density on membrane 0.009 nm-2
k AP−CLA AP-2 & clathrin binding rate 0.0012 μM-1s-1
k CLA−CLA Clathrin & clathrin binding rate without AP-2 0.083 μM-1s-1
ΔG coop Cooperative energy from AP-2 binding -2.4 kBT
ΔG strain Strain energy for closed polygons 6.9 kBT
h Length-scale from dimensional reduction 30 nm