Table 1. Each parameter varied in the RD model to reproduce in vitro experimental kinetics, along with the optimal values we found.
Parameters | Explanations | Optimal values |
---|---|---|
ρ AP | AP-2 density on membrane | 0.009 nm-2 |
k AP−CLA | AP-2 & clathrin binding rate | 0.0012 μM-1s-1 |
k CLA−CLA | Clathrin & clathrin binding rate without AP-2 | 0.083 μM-1s-1 |
ΔG coop | Cooperative energy from AP-2 binding | -2.4 kBT |
ΔG strain | Strain energy for closed polygons | 6.9 kBT |
h | Length-scale from dimensional reduction | 30 nm |