TABLE 4.
Molecular docking of potentially toxic components of vine tea.
| PDB ID | Pocket size (Xmin Xmax, Ymin Ymax, Zmin Zmax) | Pubchem id | Score (kcal/mol) |
|---|---|---|---|
| 3BDY | -55.137 -43.843,-63.747 -51.128,-6.532 6.32 | 56603655 | −6.12 |
| 1DGF | 17.059 37.69,65.515 85.329,60.61 78.625 | 15559239 | −5.71 |
| 72281 | −6.21 | ||
| 5281672 | −6.22 | ||
| 6072 | −8.42 | ||
| 1GKC | 57.951 73.263,23.793 38.373,108.689 126.996 | 54671203 | −5.88 |
| 161557 | −6.09 | ||
| 5281672 | −6.43 | ||
| 6072 | −7.22 | ||
| 5280343 | −6.14 | ||
| 3NOA | -17.606 -1.512,-1.912 13.828,27.491 52.487 | 3651377 | −5.17 |
| 161557 | −6.26 | ||
| 5280863 | −6.07 | ||
| 5281672 | −6.31 | ||
| 6072 | −7.74 | ||
| 5280343 | −6.35 | ||
| 439533 | −6.29 | ||
| 6EHA | 8.197 22.295,-8.896 6.105,25.248 42.982 | 4971 | −4.75 |
| 4788 | −6.35 | ||
| 5280343 | −6.12 | ||
| 2F8X | 79 103,51 85,-22 14 | 43815 | −6.55 |
| 122850 | −6.06 | ||
| 161557 | −6.55 | ||
| 5280863 | −6.12 | ||
| 5281672 | −6.57 | ||
| 4788 | −6.45 | ||
| 6072 | −8.63 | ||
| 5280343 | −6.22 | ||
| 439533 | −6.21 | ||
| 1ZTE | 26 46,-1.1 16.9,51 67 | 29327 | −5.49 |
| 6072 | −7.04 | ||
| 5ACC | 5.996 22.284,13.209 31.381,57.414 75.909 | 104741 | −6.36 |
| 6072 | −6.66 | ||
| 2W96 | -1 25,-10 16,19 45 | 119307 | −4.56 |
| 1RTG | 10 30,20 36,7.5 21.5 | 23310222 | −5.2 |
| 6072 | −6.4 | ||
| 4N0S | -22.432 -7.127,5.408 20.213,34.982 46.184 | 2146 | −3.15 |
| 6072 | −6.8 | ||
| 1P22 | -15 5,18 38,-23 -3 | 40486 | −6.79 |
| 72320 | −6.13 | ||
| 6072 | −6.97 | ||
| 3RLJ | 19.021 34.81,-4.706 11.518,-0.91 16.722 | 67171867 | −8.34 |
| 161557 | −6.7 | ||
| 72281 | −6.03 | ||
| 5280863 | −6.03 | ||
| 5281672 | -6.14 | ||
| 4788 | -6.6 | ||
| 6072 | −6.16 | ||
| 5280343 | −6.5 | ||
| 439533 | −6.32 | ||
| 3SWR | -12.867 2.786,-10.553 8.655,23.049 40.581 | 702558 | −6.64 |
| 161557 | −6.78 | ||
| 5281672 | −6.65 | ||
| 4788 | −6.38 | ||
| 6072 | −7.95 | ||
| 5280343 | −6.62 | ||
| 3RCD | 2.899 22.061,-7.118 13.045,19.662 36.368 | 5280343 | −5.99 |
| 161557 | −6.06 | ||
| 5281672 | −6.45 | ||
| 6072 | −7.06 | ||
| 5BUA | 91.7 111.7,69.5 89.5,-24.9 -4.9 | 6450226 | −3.89 |
| 6072 | −6.37 |