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. 2022 Jan 30;12(7):3809–3827. doi: 10.1039/d1ra06149f

Structure of Scheme 2 compounds with their elemental property, docking score, MM-GBSA binding energy (ΔGbind) and enzyme-based inhibition activity. The biological evaluation of enzyme-based inhibitory activity of test compounds at 10 μm concentration was obtained against recombinant human Sirt1, n = 3, and the results were represented as the mean of three independent experimentsa.

graphic file with name d1ra06149f-u14.jpg
Comp. R R1 R2/R3 Mol. mass Static docking Sirt1 (kcal mol−1) IF guided docking Sirt1 % inhibition at 10 μM Sirt1
Dock score (kcal mol−1) ΔGbind (kcal mol−1)
13a –H –OMe –H 375.42 −7.42 −6.54 −47.19 <30
13b graphic file with name d1ra06149f-u15.jpg –OMe –H 389.44 −7.64 −6.18 −46.74 <30
13c graphic file with name d1ra06149f-u16.jpg –OMe –H 465.08 −5.81 −7.44 −40.64 <30
13d graphic file with name d1ra06149f-u17.jpg –OMe –H 504.58 −6.90 −7.26 −63.40 90.64
13e –H –H –F 381.37 −7.50 −6.36 −48.85 <30
13f graphic file with name d1ra06149f-u18.jpg –H –F 395.40 −7.22 −6.51 −48.22 <30
13g graphic file with name d1ra06149f-u19.jpg –H –F 471.50 −5.05 −7.42 −52.96 <30
13h graphic file with name d1ra06149f-u20.jpg –H –F 510.53 −7.88 −7.21 −60.23 89.15
13i –H –NO2 –H 390.39 −7.18 −6.97 −59.30 <30
13j graphic file with name d1ra06149f-u21.jpg –NO2 –H 404.42 −4.52 −7.70 −53.11 <30
13k graphic file with name d1ra06149f-u22.jpg –NO2 –H 480.51 −3.68 −6.27 −56.01 <30
13l graphic file with name d1ra06149f-u23.jpg –NO 2 –H 519.55 −5.50 −7.09 −70.88 89.64
Control Ex527 −7.78 −63.58 97.73
a

The italicized rows represent the ligands chosen for further studies.