The Poisson–Boltzmann (PB) binding free energy (ΔGbind_pbsa) of Sirt1 complexed with inhibitors Ex527, 7d and 13h. In all the results energy (kcal mol−1) was represented as mean ± SE.
Energy component | Average energy in kcal mol−1 | ||
---|---|---|---|
Ex527 | 7d | 13h | |
ΔEint | 0 | 0 | 0 |
ΔEvdW | −31.31 ± 0.33 | −54.88 ± 0.58 | −43.77 ± 0.42 |
ΔEele | −22.13 ± 0.51 | −86.63 ± 1.30 | −82.11 ± 1.20 |
ΔEpb_solv | 32.76 ± 0.47 | 119.88 ± 1.58 | 102.44 ± 1.08 |
ΔEnp_solv | −2.97 ± 0.01 | −5.96 ± 0.03 | −4.49 ± 0.02 |
ΔGgas | −53.65 | −141.51 ± 1.55 | −125.88 ± 1.30 |
ΔGsolv | −29.79 ± 0.47 | 113.91 ± 1.56 | 97.95 ± 1.07 |
ΔH | −23.66 ± 0.37 | −27.60 ± 0.78 | −27.93 ± 0.67 |
T × ΔS | −18.80 ± 0.85 | −26.70 ± 0.92 | −23.50 ± 2.36 |
ΔG bind_pbsa (kcal mol −1 ) | −4.86 | −1.10 | −4.43 |