Table 3.
The prediction of ubiquitinated sites in HO-1 by BDT algorithm
| Peptide | Position | Score | Threshold |
|---|---|---|---|
| QDLSEALKEATKEVH | 18 | 2.14 | 0.3 |
| EALKEATKEVHTQAE | 22 | 1.65 | 0.3 |
| QVTRDGFKLVMASLY | 48 | 1.26 | 0.3 |
| FPEELHRKAALEQDL | 86 | 0.92 | 0.3 |
| PAMQRYVKRLHEVGR | 116 | 2.27 | 0.3 |
| LSGGQVLKKIAQKAL | 148 | 1.34 | 0.3 |
| SGGQVLKKIAQKALD | 149 | 2.40 | 0.3 |
| VLKKIAQKALDLPSS | 153 | 2.69 | 0.3 |
| PNIASATKFKQLYRS | 177 | 0.46 | 0.3 |
| QRVIEEAKTAFLLNI | 204 | 0.49 | 0.3 |
| LRQRASNKVQDSAPV | 243 | 0.47 | 0.3 |
| PVETPRGKPPLNTRS | 256 | 0.78 | 0.3 |
HO-1, heme oxygenase-1; BDT, Bayesian decision theory; K: Lysine residues potentially ubiquitinylated. Higher score indicates the higher probability of ubiquitination.