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. 2022 Jan 25;27(1):22–29. doi: 10.6065/apem.2142144.072

Table 2.

Genetic analysis results of 13 osteogenesis imperfecta patients confirmed by COL1A1 and COL1A2 gene analysis

No. Sex Age (yr) Sillence classification Gene Nucleotide change Amino acid change ACMG criteria Mutation type PolyPhen-2 SIFT Mutation Taster CADD score Clinical score
1 F 51.5 Ia COL1A1 c.148C>T p.R50* Pathogenic Quantitative ND ND Damaging 34 11
2 F 2.7 Ia COL1A1 c.1984-7_1985del Small deletion Pathogenic Quantitative ND ND Damaging ND 8
3 F 5.0 Ia COL1A1 c.2830-3A>G Splice site Likely pathogenic Quantitative ND ND Damaging 14.41 6
4 F 3.5 Ia COL1A1 c.3207+1G>A Splice site Pathogenic Quantitative ND ND Damaging 35 8
5 F 0.9 Ia COL1A1 c.3207+1G>A Splice site Pathogenic Quantitative ND ND Damaging 35 7
6 M 5.8 Ib COL1A2 c.595-1G>C Splice site Pathogenic Quantitative ND ND Damaging 33 6
7 F 1.0 Ib COL1A1 c.1678G>A p.G560S Pathogenic Qualitative Damaging Damaging Damaging 29 11
8 F 2.1 Ib COL1A2 c.1694G>C p.G565A Likely pathogenic Qualitative Damaging Damaging Damaging 25.6 11
9 M 11.0 III COL1A2 c.982G>A p.G328S Pathogenic Qualitative Damaging Damaging Damaging 28.5 14
10 M 13.0 IV COL1A2 c.2324G>A p.G775E Likely pathogenic Qualitative Damaging Damaging Damaging 32 10
11 M 6.0 IV COL1A1 c.635G>A p.G212E Pathogenic Qualitative Damaging Damaging Damaging 26.4 10
12 M 36.3 IV COL1A2 c.3016G>A p.G1006S Likely pathogenic Qualitative Damaging Damaging Damaging 29.7 12
13 M 18.1 IV COL1A1 c.1003G>A p.G335S Pathogenic Qualitative Damaging Damaging Damaging 33 12

ACMG, The American College of Medical Genetics and Genomics; PolyPhen, Polymorphism Phenotyping; SIFT, Sorting Intolerant from Tolerant; CADD, The Combined Annotation Dependent Depletion; ND, not done.