TABLE 3.
RFLP analyses of resistance gene cassettes found in class 1 integrons in V. cholerae
| Gene cassette | Size (bp) of amplicon obtained with primers in-F and in-B | Restriction enzyme used | Restriction fragment sizes (bp) | GenBank no. of identical sequence | Reference |
|---|---|---|---|---|---|
| aadA2 | 1,009 | HindIII | 216, 275, 517 | D43625 | 31 |
| dfrA1 | 1,237a | ClaI | 436, 801 | X17477 | 48 |
| dfrA15 | 739 | HindIII | 315, 424 | Z83311b | 2 |
| aadB | 744 | SphI | 175, 569 | L06418 | 10 |
| blaP1 | 1,197 | MfeI | 258, 939 | AF071555 | 9 |
The amplicon contained both the dfrA1 gene cassette and an open reading frame. See also Fig. 1.
The sequence with this GenBank no. included some of the aadA gene sequence located downstream of the dfrA15 gene cassette.