Table 6.
Summary of most important MTAs for MAS
| SNP | Chr | Pos. of SNP tags | Allele# | Description |
|---|---|---|---|---|
| SNP_3202 | 3A | 593,990,302–593,990,370 | A/G# | Detected using CMLM, FarmCPU and SUPER: associated with GL |
| SNP_9744 | 2B | 800,127,644–800,127,712 | G/C | Detected using mvLMM and identified in the both environments: associated with GL-GWid-GLWR-GFD |
| SNP_912 | 6B | 674,558,317–674,558,364 | C/G | Same as above |
| SNP_7441 | 3A | 731,844,353–731,844,410 | A/G | Detected using CMLM: associated with GL |
| SNP_5401 | 2A | 79,343,336–79,343,404 | G/T | Detected using CMLM: associated with Gwid |
| SNP_4648 | 7A | 94,143,005–94,143,073 | G/T | Same as above |
| SNP_12288 | 2B | 683,768,477–683,768,545 | T/C | Detected using CMLM: associated with GLWR |
| SNP_4563 | 2B | 571,070,836–571,070,884 | C/A | Detected using FarmCPU: associated with GCSA |
| SNP_11360 | 1A | 6,341,227–6,341,295 | T/G | Detected using epistasis: associated with GLWR |
| SNP_11245 | 7B | 739,999,777–739,999,837 | C/G | Same as above |
| SNP_12855 | 5B | 43,824,419–43,824,487 | G/A | Same as above |
| SNP_2977 | 7B | 678,267,823–678,267,891 | T/G | Same as above |
| SNP_5634 | 2D | 82,867,198–82,867,237 | G/A | Detected using epistasis: associated with GFD |
| SNP_1974 | 5A | 480,099,548–480,099,616 | T/G | Same as above |
Chr; chromosome, Pos; position (base pair) and #; desirable allele