Table 2.
Prediction of MHC-I epitopes from CEA by three different servers
Servers | Start position | Sequences | Best ranked epitope in the region |
---|---|---|---|
Rankpep | Scorea | ||
467 | ITEKNSGLY | 26.094 | |
205 | VTRNDTASY | 17.906 | |
241 | TISPLNTSY | 16.692 | |
645 | ITPNNNGTY | 16.283 | |
Scoreb | |||
SYFPEITHI | 467 | ITEKNSGLY | 30 |
168 | EPETQDAT | 24 | |
346 | EPEIQNTTY | 24 | |
524 | EPEAQNTTY | 24 | |
Percentile rankc | |||
IEBD | 40 | NRSDPVTLDVLY | 0.05 |
5 | YLSGANLNL | 0.05 | |
38 | SANRSDPVTLDVLY | 0.05 | |
8 | SPRLQLSNGNRTL | 0.05 |
aHigh, bhigh Log, and clow percentile¼good binder