Table 4.
Prediction of MHC-I epitopes from MUC-1 by three different servers
| Server | Start position | Sequences | Best ranked epitope in the region |
|---|---|---|---|
| Rankpep | Scorea | ||
| 940 | SAPDNRPAL | 22.273 | |
| 971 | TLVHNGTSA | 10.903 | |
| 1171 | VALAIVYLI | 9.398 | |
| 1186 | CRRKNYGQL | 9.074 | |
| SYFPEITHI | Scoreb | ||
| 940 | SAPDN PAL | 29 | |
| 48 | STEKNAVSM | 25 | |
| 1186 | CRRKNYGQL | 20 | |
| 120 | SAPDNKPAP | 19 | |
| IEBD | Percentile rankc | ||
| 35 | NSSLEDPSTDYY | 0.04 | |
| 5 | PMSEYPTYHTHGRY | 0.31 | |
| 17 | RYVPPSSTDRSPY | 0.4 |
aHigh, bhigh log, and clow percentile¼good binder