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. 2022 Mar 24;13:850201. doi: 10.3389/fgene.2022.850201

FIGURE 5.

FIGURE 5

Circos plot based on complete plastome alignment of newly sequenced plastomes (Thuniopsis cleistogama and Thunia alba) and relatives available at NCBI (MN562087, MT193723, MW699846 and NC_036342). Ring “1” shows the reference plastome alignment of Thuniopsis cleistogama_L04, with coding genes labeled in dark blue, rRNAs in red and tRNAs in green. Inner ring, gray: IR region, white: LSC and SSC regions. The rings “2–10” indicate SNPs and InDels, respectively. Blue shadows denote the locations of SNPs; Red shadows denote the locations of InDels. The height of columns in rings “2–10” represents the relative number of polymorphic loci. From outside to inside, ring “10” shows MW699846 (gray); ring “9” shows NC_036342 (pink); ring “8” shows MN562087 (blue); ring “7” shows MT193723 (light green); ring “6” shows Thunia alba_01 (light yellow); ring “5” shows Thunia alba_02 (light blue). ring “4” shows Thuniopsis cleistogama_03 (dusty gray); ring “3” shows Thuniopsis cleistogama 04 (ochre); ring “2” shows Thuniopsis cleistogama_05 (light pink). Two contiguous rings with same color indicate positive and negative strand, respectively.