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. Author manuscript; available in PMC: 2022 Apr 7.
Published in final edited form as: J Phys Chem B. 2021 Jun 9;125(24):6479–6490. doi: 10.1021/acs.jpcb.1c02467

Table 1:

Number of ions needs to satisfy the different ion-environment conditions. In each condition-dependent simulation, raw salt concentration []* corrected bulk concentrations [] determined (using the aforesaid approach) and calculated preferential interaction coefficients,Γ.

Chelated Mg2+ + + + + - -
[Mg2+] =2.0 mM + + - - - -
Temp ➔ T T* T T* T T*
 
NMg2+ 11 11 2 2 0 0
NK+ 116 116 138 138 138 138
NCl- 46 46 50 50 46 46
[Mg2+ ]* mM a 2.8 2.86 - - - -
[K+]* mM 112 110.3 120.6 117 115.0 116.0
[Cl]* mM 95 94.9 103.1 103 95.1 99
[Mg2+] mM b 2.2 2.3 - - - -
[K+] mM 100.5 99.5 111.1 109.5 104 107.2
[Cl] mM 105 104.1 111.1 109.5 104 107.2
ΓMg2+ 9.74 9.69 - - - -
ΓK+ 58.59 59.16 74.53 75.58 78.54 76.88
ΓCl −13.98 −13.47 −13.50 −12.42 −13.41 −15.12
a

Raw concentration: Raw concentrations are determined 20 Å beyond RNA (asterisk),

b

Corrected bulk concentrations are determined using a small potential perturbation approximation method.