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. 2022 Apr 8;7:28. doi: 10.1038/s41525-022-00299-9

Table 5.

Co-expression between SLC26A9 and CFTR using the Human Lung Cell Atlas data40.

Cell Type Number of cells Zero-inflated negative binomial model Spearman’s correlation
Effect size S.E. P-value Rho P-value
Club 895 −0.00007 0.00125 0.9564 0.05173 0.12196
AT2a 760 0.00035 0.00013 0.0097 0.13215 0.00026
Basal 240 −11.6529 94.6542 0.9020 −0.02365 0.71544
AT1a 421 −8.41119 152.863 0.9561 −0.01178 0.80962
AT2-sa 201 0.00143 0.00122 0.2433 0.28686 0.00004
Differentiating Basal 43 −0.02385 0.01931 0.2168 0.07235 0.64478
AT2 and AT2-s 961 0.00041 0.00014 0.0036 0.16567 <0.0001
AT1, AT2 and AT2-s 1382 0.00048 0.00015 0.0018 0.32261 <0.0001

The effect size estimate from zero-inflated negative binomial model indicates log-ratio relations between CFTR and SLC26A9 expression. Values greater than zero correspond to positive co-expression. Spearman’s correlation estimates (rho) were calculated using log-transformed read counts per million measures for CFTR and SLC26A9. The Spearman’s correlation and the zero-inflated negative binomial model analysis were performed by R function cor.test() and the zeroinfl() function in the package pscl90, respectively. All p-values indicate two-sided statistical test results.

aAT2 Alveolar Epithelial Type 2; AT1 Alveolar Epithelial Type 1; AT2-s Signaling Alveolar Epithelial Type 2