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. 2000 Jun;44(6):1713–1715. doi: 10.1128/aac.44.6.1713-1715.2000

TABLE 1.

PCR primers for sequencing, cloning, site-directed mutagenesis, and amplification for transformation

Fragment Primer Nucleotide sequence (5′ to 3′)a Position and direction
V149 rpoB-ri 1 CCCAACAGATTTAGAAGT bp 54, sense
RpoB-ri 1-B (BglII) ATTA AGATCT CCCAACAGATTTAGAAGT bp 54, sense
rpoB-ri-F GATCCCTTTGATGACAGAAC bp 387, sense
rpoB-ri-R TACCATAACAGGCTCAGC bp 916, antisense
RpoB-ri-R-X (XhoI) TTTAA CTCGAG TACCATAACAGGCTCAGC bp 916, antisense
V149X/Muta for NNNAATCAACTCCACAGAAGCCb bp 446, sense
V149X/Muta rev CACCACGCGCTCCACCC bp 445, antisense
Cluster RpoB5 AAATGATCACAAGCACCATC bp 1530, sense
rpoB-CL ACCTTGCCATCCACAACC bp 1839, antisense
rpoB-CLF ATGTGCCTGATTACATCACGAC bp 1371, sense
rpoB-CLR TTGGCGCTGCATGTTAGTCC bp 2106, antisense
R701 rpoB ecF GGTAGCCGCATCGCTCATTC bp 2028, sense
rpoB ecR TGCCTACAATGGGAGCGTC bp 2146, antisense
RpoB701F-B (BglII) ATTA AGATCT CCTTTCCACTTTCACAAGAG bp 1764, sense
RpoB701F-X (XhoI) TTTAA CTCGAG TTCCCTAACGCTAACTCG bp 2423, antisense
R710H-For ACCAAGCGGTGCCGTTATTc bp 2102, sense
R701H-Rev GCTGCATGTTAGTCCCCATTA bp 2101, antisense
a

Italics indicate introduced restriction sites; underlining indicates introduced mutations. 

b

Introduction of the completely randomized codon from bp 446 to 448, GTC to NNN. 

c

Introduction of the mutation CGC to CAC into codon from bp 2101 to 2103.