Table 3.
The performance of correctness with the best pair of (dcn,kvar) for each threshold of the size of the model among training dataset. The best pairs are chosen from the result in Fig. 2 that shows best microAUC score in the same thresholds. We note that 10-fold cross validation is used on the training set
| Threshold of the model size | dcn | kvar | Filtered genes | microAUC | Accuracy | |
|---|---|---|---|---|---|---|
| CN | Variants | |||||
| 512 | 0.17 | 60 | 243 | 265 | 0.98179 | 0.83321 |
| 1024 | 0.13 | 90 | 358 | 404 | 0.98523 | 0.84317 |
| 2048 | 0.08 | 270 | 709 | 1198 | 0.98625 | 0.86827 |
| 4096 | 0.08 | 550 | 709 | 2364 | 0.98704 | 0.86974 |