Table 3.
Detailed Information on the Top 20 Up-Regulated DEGs
| Up-Regulated Gene | Gene ID | Location | Log2 Fold Change (SMIR/Sham) | Q value | Official Gene Name (NCBI) |
|---|---|---|---|---|---|
| Heatr1 | 361262 | chr17:66446135–66495506 | 10.97753865 | 5.68E-09 | HEAT repeat containing 1 |
| LOC103694869 | 103694869 | NW_007906808.1:134857–155285 | 9.99681143 | 2.19E-83 | Isochorismatase domain-containing protein 1 |
| NEWGENE_1310680 | 108348045 | chr1:220462462–220467269 | 8.387705661 | 9.66E-34 | Transmembrane protein 151A |
| LOC100911730 | 100911730 | chr1:214009687–214013762 | 7.853231583 | 1.01E-24 | CD151 antigen-like |
| LOC100912475 | 100912475 | chr1:77829695–77830416 | 7.579331227 | 3.50E-07 | Consortin-like |
| LOC103690175 | 103690175 | chrX:158265270–158288228 | 7.508770847 | 3.70E-20 | PHD finger protein 6 |
| RGD1566138 | 498167 | chr12:21950846–21980699 | 7.336970389 | 3.39E-18 | Similar to Zinc finger, CW type with PWWP domain 1 |
| LOC102550456 | 102550456 | chr12:21748608–21761500 | 7.111172475 | 6.68E-16 | TSC22 domain family protein 4-like |
| LOC103692570 | 103692570 | chr6:26423841–26446080 | 7.008208521 | 6.11E-15 | Dihydropyrimidinase-related protein 5-like |
| Dgcr2 | 360742 | chr11:87242441–87290806 | 6.683737062 | 2.92E-12 | DiGeorge syndrome critical region gene 2 |
| LOC108348079 | 108348079 | chrX:124516931–124518080 | 6.624716548 | 7.96E-12 | RING finger protein 113A-like |
| LOC100911725 | 100911725 | chr8:118390023–118416270 | 6.478945409 | 8.32E-11 | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4-like |
| LOC100364457 | 100364457 | chr1:77829695–77830416 | 6.361739792 | 4.73E-10 | Ribosomal protein L9-lik |
| Slc40a1 | 170840 | chr9:52819451–5283046 | 6.315701772 | 9.01E-10 | Solute carrier family 40 member 1 |
| LOC100909913 | 100909913 | chrX:6258264–6282760 | 6.275508647 | 1.56E-09 | Norrin-like |
| LOC100911168 | 100911168 | chrX:63392209–63397468 | 6.191793172 | 9.96E-11 | Kelch-like protein 15-like |
| LOC108348080 | 108348080 | chr5:137670134–137674730 | 6.116511993 | 1.22E-08 | Probable rRNA-processing protein EBP2 |
| LOC103689983 | 103689983 | chrX:158623231–158655277 | 5.976710792 | 6.33E-08 | Hypoxanthine-guanine phosphoribosyltransferase |
| LOC100911585 | 100911585 | chr9:20241067–20251271 | 5.887066102 | 1.76E-35 | Leucine-rich repeat-containing protein 23-like |
| Potef | 684969 | chr18:24780521–24783147 | 5.742829959 | 7.42E-07 | POTE ankyrin domain family, member F |