TABLE 3.

Primers and probes used for molecular quantification in this study

Target	Name	Sequence
Erwinia amylovora	Ea-Lsc-F	CGC TAA CAG CAG ATC GCA
	Ea-Lsc-R	AAA TAC GCG CAC GAC CAT
	Ea-Lsc-P	/5Cy5/CTG ATA ATC CGC AAT TCC AGG ATG/3IAbRQsp/
ΦEa21-4	END37-F	TTC AGC TTT AGC GGC TTC GAG A
	END37-R	AGC AAG CCC TTG AGG TAA TGG A
	END37-P	/56-ROXN/AGT CGG TAC ACC TGC AAC GTC AAG AT/3IAbRQSp/
pEA-CRR1Φ & pEA-CRR2Φ	pEA-CRR-F	CTG GTC AGC ATC ACT AGC ATA A
	pEA-CRR-R	ACC TCG AAG AAG GCG GAT AG
	pEA-CRR-P	/5Cy5/TTT CTG CGC/TAO/GTA ATC TGC TGC TTG/3IAbRQSp/
pEA-iMGE	pEA-iMGE-F	CAT CAC TGG CCT CCT ACT TTA C
	pEA-iMGE-R	CCA AGG CAC CTC ACA TAC TT
	pEA-iMGE-P	/56-FAM/TCC ACT ACG/ZEN/GCC ATC TGT TTC ACG/3IABkFQ/