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. 2022 Feb 14;38(8):2119–2126. doi: 10.1093/bioinformatics/btac083

Table 2.

AUROC and AUPRC scores on independent test set prediction, given by k-NN performed on the ProtVec and Siamese embeddings

AUROC
AUPRC
Family ProtVec Siamese ProtVec Siamese
Akt 0.908 0.897 0.462 0.513
CDK 0.889 0.892 0.511 0.538
CK2 0.906 0.893 0.665 0.714
MAPK 0.907 0.908 0.739 0.720
PIKK 0.845 0.900 0.579 0.663
PKA 0.865 0.852 0.716 0.659
PKC 0.865 0.885 0.697 0.741
Src 0.998 0.995 0.993 0.991
Macro-average 0.898 0.903 0.670 0.692
Micro-average 0.902 0.924 0.643 0.747