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. 2022 Mar 24;11:e77610. doi: 10.7554/eLife.77610

Key resources table.

Reagent type (species) or resource Designation Source or reference Identifiers Additional information
Strain, strain background (C57BL/6, males) C57BL/6 PMID:22564549 # 025750 Jackson Laboratory, Bar Harbor, ME, USA
Genetic reagent (Transfected construct (Mus musculus)) HSA-Cre PMID:22564549 # 025750 Jackson Laboratory, Bar Harbor, ME, USA
Genetic reagent (Transfected construct (Mus musculus)) Acvr1bfl/fl PMID:23109354 Cancer Research Center of Lyon, French Institute of Health and Medical Research
Genetic reagent (Transfected construct (Mus musculus)) Tgfbr1fl/fl PMID:11285230 Leiden University Medical Center
Antibody Anti-phospho-Smad2 (Ser465/467) (138D4) (Rabbit monoclonal) Cell Signaling Technology Cat# 3108, RRID:AB_490941 WB (1:500)
Antibody Anti-phospho-Smad3 (Ser423/425) (C25A9) (Rabbit monoclonal) Cell Signaling Technology Cat# 9520, RRID:AB_10203253 WB (1:500)
Antibody Anti-Smad2/3 (Mouse monoclonal) Cell Signaling Technology Cat# 610843, RRID: AB_398162 WB (1:500)
Antibody Anti-phospho-AKT (Ser473) (Rabbit monoclonal) Cell Signaling Technology Cat# 9271, RRID:AB 329825 WB (1:1000)
Antibody Anti-AKT (pan) (C67E7) (Rabbit monoclonal) Cell Signaling Technology Cat# 4691, RRID:AB_915783 WB (1:2000)
Antibody Anti-phospho-p70S6 Kinase (Thr389) (108D2) (Rabbit monoclonal) Cell Signaling Technology Cat# 9234, RRID:AB_2269803 WB (1:2000)
Antibody Anti-p70S6 Kinase (49D7) (Rabbit monoclonal) Cell Signaling Technology Cat# 2708, RRID:AB_390722 WB (1:2000)
Antibody Anti-Pan-Actin (Rabbit polyclonal) Cell Signaling Technology Cat# 4968, RRID:AB_2313904 WB (1:2000)
Antibody Anti-Rabbit Immunoglobulins/HRP (Goat polyclonal) Dako, Agilent Cat# P0448, RRID:AB_2617138 WB (1:2000)
Antibody Anti-Mouse IgG (H + L), HRP (Rabbit polyclonal) Thermo Fisher Scientific Cat# 31457, RRID:AB_228439 WB (1:2000)
Antibody Anti-MHC-I (Mouse monoclonal) DSHB Cat# BA-D5, RRID:AB_2235587 IF (1 µg/mL)
Antibody Anti-MHC-IIA (Mouse monoclonal) DSHB Cat# SC-71, RRID:AB_2147165 IF (10 µg/mL)
Antibody Anti-MHC-IIB (Mouse monoclonal) DSHB Cat# BF-F3, RRID:AB_2266724 IF (1 µg/mL)
Antibody Anti-MHC-IIX (Mouse monoclonal) DSHB Cat# 6H1, RRID:AB_1157897 IF (1 µg/mL)
Antibody Anti-embryonic myosin heavy chain (eMyHc) (Mouse monoclonal) DSHB Cat# F1.652, RRID:AB_528358 IF (20 µg/mL)
Antibody Anti-Pax7 (Mouse monoclonal) DSHB Cat# PAX7, RRID:AB_2299243 IF (4 µg/mL)
Antibody Anti-F4/80 (D4C8V) XP (Rabbit monoclonal) Cell Signaling Technology Cat# 30325, RRID:AB_2798990 IF (0.5 µg/mL)
Antibody Anti-Myogenin (Mouse monoclonal) DSHB Cat# f5d, RRID:AB_2146602 IF (0.6 µg/mL)
Antibody Anti-Ki67 (Rabbit monoclonal) Cell Signaling Technology Cat# 11882, RRID:AB_2687824 IF (1:200)
Antibody Anti-Mouse Alexa Fluor 647 IgG2b (Goat polyclonal) Thermo Scientific Cat# A-21242, RRID:AB_2535811 IF (5 µg/mL)
Antibody Anti-Mouse Alexa Fluor 488 IgG1 (Goat polyclonal) Thermo Scientific Cat# A-21121, RRID:AB_2535764 IF (5 µg/mL)
Antibody Anti-Mouse Alexa Fluor 647 IgM (Goat polyclonal) Thermo Scientific Cat# A21238, RRID:AB_1500930 IF (5 µg/mL)
Antibody Anti-Mouse Alexa Fluor 488 IgM (Goat polyclonal) Thermo Scientific Cat# A-21042, RRID:AB_141357 IF (5 µg/mL)
Antibody Anti-Mouse Alexa Fluor 488 IgG (H + L) (Goat polyclonal) Thermo Scientific Cat# A-11029, RRID:AB_2534088 IF (4–5 µg/mL)
Antibody Anti-rabbit IgG (H + L), F(ab')2 Fragment Alexa Fluor 488 Conjugate (Goat polyclonal) Cell Signaling Technology Cat# 4412, RRID:AB_1904025 IF (5 µg/mL)
Sequence-based reagent Rps13-F This paper PCR primers CACGTGGCTGAAGTTGACG
Sequence-based reagent Rps13-R This paper PCR primers CAGGATTACACCTATCTGGGAGG
Sequence-based reagent Rpl27-F This paper PCR primers AGCCGTCATCGTGAAGAAC
Sequence-based reagent Rpl27-R This paper PCR primers GGGGATAGCGGTCAATTCC
Sequence-based reagent Tgfbr1-F This paper PCR primers CCTCGAGACAGGCCATTTGT
Sequence-based reagent Tgfbr1-F This paper PCR primers AGACGAAGCAGACTGGACCA
Sequence-based reagent Acvr1b-F This paper PCR primers TGCTGCGCCATGAAAACATC
Sequence-based reagent Acvr1b-F This paper PCR primers TGCCCACAATCTCCATATGCA
Sequence-based reagent Tgfb1-F This paper PCR primers GCTGACCCCCACTGATACG
Sequence-based reagent Tgfb1-R This paper PCR primers CCTGTATTCCGTCTCCTTGGTT
Sequence-based reagent Mstn-F This paper PCR primers GAGAATGGCCATGATCTTGCTG
Sequence-based reagent Mstn-R This paper PCR primers CTTCTAAAAAGGGATTCAGCCCATC
Sequence-based reagent Igf1ea-F This paper PCR primers GTGTTGCTTCCGGAGCTGTG
Sequence-based reagent Igf1ea-R This paper PCR primers CAATGTACTTCCTTCTGAGTC
Sequence-based reagent Hgf-F This paper PCR primers GATTATTGCCCTATTTCCCGTTGTG
Sequence-based reagent Hgf-R This paper PCR primers TGGCACAGGATATTACAGGATGG
Sequence-based reagent Igf1ec-F This paper PCR primers GGAGAAGGAAAGGAAGTACATTTG
Sequence-based reagent Igf1ec-R This paper PCR primers CCTGCTCCGTGGGAGGCT
Sequence-based reagent Vegfa-F This paper PCR primers CTGTAACGATGAAGCCCTGGAGTG
Sequence-based reagent Vegfa-R This paper PCR primers GGTGAGGTTTGATCCGCATGATCT
Sequence-based reagent Pax7-F This paper PCR primers TCCATCAAGCCAGGAGACA
Sequence-based reagent Pax7-R This paper PCR primers AGGAAGAAGTCCCACACAG
Sequence-based reagent Myod-F This paper PCR primers CATCCAGCCCGCTCCAAC
Sequence-based reagent Myod-R This paper PCR primers GGGCCGCTGTAATCCATCATGCC
Sequence-based reagent Myog-F This paper PCR primers CCCAACCCAGGAGATCATTT
Sequence-based reagent Myog-R This paper PCR primers GTCTGGGAAGGCAACAGACA
Sequence-based reagent Myh3-F This paper PCR primers CGCAGAATCGCAAGTCAATA
Sequence-based reagent Myh3-R This paper PCR primers CAGGAGGTCTTGCTCACTCC
Sequence-based reagent Id1-F This paper PCR primers ACCCTGAACGGCGAGATCA
Sequence-based reagent Id1-R This paper PCR primers TCGTCGGCTGGAACACAT
Sequence-based reagent Fgf2-F This paper PCR primers AAGCGGCTCTACTGCAAGAA
Sequence-based reagent Fgf2-R This paper PCR primers GTAACACACTTAGAAGCCAGCAG
Sequence-based reagent Ccn2-F This paper PCR primers CCACCCGAGTTACCAATGAC
Sequence-based reagent Ccn2-R This paper PCR primers GCTTGGCGATTTTAGGTGTC
Sequence-based reagent Col1a1-F This paper PCR primers ATGTTCAGCTTTGTGGACCT
Sequence-based reagent Col1a1-R This paper PCR primers CAGCTGACTTCAGGGATGT
Sequence-based reagent Col3a1-F This paper PCR primers AAGGACATCGAGGATTCCCTG
Sequence-based reagent Col3a1-R This paper PCR primers AGCCCTCAGATCCTCTTTCAC
Sequence-based reagent Cd68-F This paper PCR primers TCCCAACAAAACCAAGGTCCA
Sequence-based reagent Cd68-R This paper PCR primers GGCTCTGATGTAGGTCCTGTTT
Sequence-based reagent Cd163-F This paper PCR primers CGGCCCCATGAAGAGGTATC
Sequence-based reagent Cd163-R This paper PCR primers GACGGTTGACCCAGTTGTTG
Sequence-based reagent Il1b-F This paper PCR primers GCCACCTTTTGACAGTGATG
Sequence-based reagent Il1b-R This paper PCR primers CTTCTCCACAGCCACAATGA
Sequence-based reagent Il6-F This paper PCR primers GGAAATGAGAAAAGAGTTGTGC
Sequence-based reagent Il6-R This paper PCR primers GTACTCCAGAAGACCAGAGGA
Sequence-based reagent Fbxo32-F This paper PCR primers AGACTGGACTTCTCGACTGC
Sequence-based reagent Fbxo32-R This paper PCR primers TCAGCTCCAACAACAGCCTTACT
Sequence-based reagent Trim63-F This paper PCR primers CGTCCAGAGCGTGTGTCTCACTC
Sequence-based reagent Trim63-R This paper PCR primers GGGCTACCTTCCTCTCAAGTGC
Sequence-based reagent Tcf4-F This paper PCR primers GGAAAGCCCTAGCTTCGATCT
Sequence-based reagent Tcf4-R This paper PCR primers GGAGCCCACAGGAGTTGAA
Sequence-based reagent Pdgfra-F This paper PCR primers ACTTTTCACTCCGGGTATCGG
Sequence-based reagent Pdgfra-R This paper PCR primers CCCATAGCTCCTGAGACCTTC
Commercial assay or kit RiboPure RNA Purification Kit Thermo Fisher Scientific AM1924
Commercial assay or kit SuperScript VILO Mastermix Thermo Fisher Scientific 12023679