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. 2022 Apr 12;13:1948. doi: 10.1038/s41467-022-29518-8

Fig. 2. Comparison between the TE annotation in FlyBase and the TE annotation performed using REPET with the MCTE library.

Fig. 2

In blue copies annotated with REPET and in red copies annotated by FlyBase in the reference genome. a Number of TE copies per family. b Overlapping of TE annotations considering that the copies were from the same family and that they were overlapping at least 95% of their lengths (breadth of coverage). TEs shorter than 100 bp, belonging to the INE-1 family and nested TEs were excluded from the analysis. c Distribution of number of TE copies by length in 500 bp bin sizes.