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. Author manuscript; available in PMC: 2022 Apr 13.
Published in final edited form as: Nature. 2021 Jun 23;595(7868):554–559. doi: 10.1038/s41586-021-03670-5

Figure 2. Spatial distribution of cell types in the developing cortex.

Figure 2.

a Mapping probability of the main cell types from scRNA-seq onto a matching Slide-seq tissue section using Tangram (right). Left: whole puck with beads colored based on clustering. The area used for the mappings is highlighted. Colored bars represent cell type distribution. Dv, dorso-ventral; ml, medio-lateral.

b Re-clustering of sub-states of E15.5 migrating excitatory neurons. Mapping of sub-states onto E15.5 tissue indicates differential positioning across the radial axis of the cortex. DAPI staining of adjacent section for reference. Expression of genes associated with migrating neuron sub-states in E15.5 Slide-seq.