Method workflow: (top) overview of the approach; (bottom)
matrices
calculated at each step; Step 1: Distances between all features are
calculated (RTdist, MZdist, log10FIdist) and linear thresholds
set in all dimensions, finding “M” candidate matches
between feature sets; Step 2: Find one-to-one feature correspondence:
2a: The expected inter-dataset shifts are modeled using neighbor consensus;
2b: residuals can then be obtained for each candidate match, normalized;
2c and 2d: transformed into single-value penalization scores; 2e:
these are used to define feature-pair matrices containing only “U”
unique matches. Step 3. A nonlinear tightening of thresholds is applied
to filter out poor matches far from the inter-dataset shifts, yielding
“U*” unique matches.