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. 2022 Apr 15;39(5):110754. doi: 10.1016/j.celrep.2022.110754
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Casirivimab Laboratory of Hans-Martin Jäck N/A
Imdevimab Laboratory of Hans-Martin Jäck N/A
Bamlanivimab Laboratory of Hans-Martin Jäck N/A
Etesevimab Laboratory of Hans-Martin Jäck N/A
hIgG Laboratory of Hans-Martin Jäck N/A
Goat anti-Human IgG (H + L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 Thermo Fisher Scientific Cat# A-11013; RRID: AB_2534080
Goat anti-Human IgG (Fc)-HRPO Dianova Cat# 109-035-098; RRID: AB_2337586
Anti-VSV-G antibody (I1, produced from CRL-2700 mouse hybridoma cells) ATCC Cat# CRL-2700; RRID: CVCL_G654

Bacterial and virus strains

VSVΔG-FLuc Laboratory of Gert Zimmer N/A
One Shot™ OmniMAX™ 2 T1R Chemically Competent E. coli Thermo Fisher Scientific Cat# C854003

Biological samples

Convalescent plasma (ID15) Laboratory of Martin S. Winkler N/A
Convalescent plasma (ID18) Laboratory of Martin S. Winkler N/A
Convalescent plasma (ID20) Laboratory of Martin S. Winkler N/A
Convalescent plasma (ID22) Laboratory of Martin S. Winkler N/A
Convalescent plasma (ID23) Laboratory of Martin S. Winkler N/A
Convalescent plasma (ID24) Laboratory of Martin S. Winkler N/A
Convalescent plasma (ID27) Laboratory of Martin S. Winkler N/A
Convalescent plasma (ID33) Laboratory of Martin S. Winkler N/A
Convalescent plasma (ID51) Laboratory of Martin S. Winkler N/A
Convalescent plasma (ID56) Laboratory of Martin S. Winkler N/A
Vaccinee serum (L3) Laboratory of Martin Lier N/A
Vaccinee serum (L4) Laboratory of Martin Lier N/A
Vaccinee serum (L9) Laboratory of Martin Lier N/A
Vaccinee serum (L11) Laboratory of Martin Lier N/A
Vaccinee serum (L12) Laboratory of Martin Lier N/A
Vaccinee serum (L13) Laboratory of Martin Lier N/A
Vaccinee serum (L16) Laboratory of Martin Lier N/A
Vaccinee serum (L22) Laboratory of Martin Lier N/A
Vaccinee serum (L25) Laboratory of Martin Lier N/A
Vaccinee serum (L26) Laboratory of Martin Lier N/A
Vaccinee serum (ID6205) Laboratory of Georg M. N. Behrens N/A
Vaccinee serum (ID6272) Laboratory of Georg M. N. Behrens N/A
Vaccinee serum (ID6236) Laboratory of Georg M. N. Behrens N/A
Vaccinee serum (ID6239) Laboratory of Georg M. N. Behrens N/A
Vaccinee serum (ID6243) Laboratory of Georg M. N. Behrens N/A
Vaccinee serum (ID6262) Laboratory of Georg M. N. Behrens N/A
Vaccinee serum (ID6297) Laboratory of Georg M. N. Behrens N/A
Vaccinee serum (ID6321) Laboratory of Georg M. N. Behrens N/A
Vaccinee serum (ID6358) Laboratory of Georg M. N. Behrens N/A
Vaccinee serum (ID6365) Laboratory of Georg M. N. Behrens N/A

Chemicals, peptides, and recombinant proteins

Soluble human ACE2 (sol-hACE2-Fc) Laboratory of Stefan Pöhlmann N/A
Lipofectamine 2000 Thermo Fisher Scientific Cat# 11668019

Critical commercial assays

Beetle-Juice Kit PJK Cat# 102511

Deposited data

N/A N/A N/A

Experimental models: cell lines

293T DSMZ Cat# ACC-635; RRID: CVCL_0063
BHK-21 Laboratory of Georg Herrler ATCC Cat# CCL-10; RRID:CVCL_1915
Caco-2 Laboratory of Stefan Pöhlmann ATCC Cat# HTB-37; RRID: CVCL_0025
Calu-3 Laboratory of Stephan Ludwig ATCC Cat# HTB-55; RRID: CVCL_0609
Huh-7 Laboratory of Thomas Pietschmann JCRB Cat# JCRB0403; RRID: CVCL_0336
NCI-H1299 Laboratory of Stefan Pöhlmann ATCC Cat# CRL-5803; RRID:CVCL_0060
Vero76 Laboratory of Andrea Maisner ATCC Cat# CRL-1586; RRID: CVCL_0574

Experimental models: organisms/strains

N/A N/A N/A

Oligonucleotides

Please see Table S3 Sigma-Aldrich N/A

Recombinant DNA

Plasmid: pCG1 Laboratory of Roberto Cattaneo N/A
Plasmid: pCAGGS-VSV-G Laboratory of Stefan Pöhlmann N/A
Plasmid: pCAGGS-DsRed Laboratory of Stefan Pöhlmann N/A
Plasmid: pCG1-SARS-2-SΔ18 (B.1), codon-optimized Laboratory of Stefan Pöhlmann N/A
Plasmid: pCG1-SARS-2-SΔ18 (B.1.351), codon-optimized Laboratory of Stefan Pöhlmann N/A
Plasmid: pCG1-SARS-2-SΔ18 (B.1.621), codon-optimized This study N/A
Plasmid: pCG1-SARS-2-SΔ18 (C.1.2 “early”), codon-optimized This study N/A
Plasmid: pCG1-SARS-2-SΔ18 (C.1.2 “late”), codon-optimized This study N/A
Plasmid: pCG1-solACE2-Fc Laboratory of Stefan Pöhlmann N/A

Software and algorithms

Hidex Sense Microplate Reader Software Hidex Deutschland Vertrieb GmbH https://www.hidex.de
YASARA (version 19.1.27) YASARA Biosciences GmbH http://www.yasara.org
SWISS-MODEL online tool Protein Structure Bioinformatics Group,
Swiss Institute of Bioinformatics
Biozentrum, University of Basel
https://swissmodel.expasy.org
Adobe Photoshop CS5 Extended (version 12.0 x 32) Adobe https://www.adobe.com/
GraphPad Prism (version 8.3.0(538)) GraphPad Software https://www.graphpad.com/
FloJo (version 10.8) Becton Dickinson https://www.flowjo.com/
Flowing Software (version 2.5.1) Turku Bioscience https://bioscience.fi/services/cell-imaging/flowing-software/
Adobe Photoshop CS5 Extended (version 12.0 x 32) Adobe https://www.adobe.com/
Microsoft Office Standard 2010 (version 14.0.7232.5000) Microsoft Corporation https://products.office.com/

Other

Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of two neutralizing antibodies (PDB: 6XDG) (Hansen et al., 2020) https://www.rcsb.org/structure/6XDG
SARS-CoV 2 Spike Protein bound to LY-CoV555 (PDB: 7L3N) (Jones et al., 2021) https://www.rcsb.org/structure/7L3N
Molecular basis for a potent human neutralizing antibody targeting SARS-CoV-2 RBD (PDB: 7C01) (Shi et al., 2020) https://www.rcsb.org/structure/7C01
Distinct conformational states of SARS-CoV-2 spike protein (PDB: 6XR8) (Cai et al., 2020) https://www.rcsb.org/structure/6XR8