REAGENT or RESOURCE	SOURCE	IDENTIFIER
Deposited data
The FinnGen data may be accessed through Finnish Biobanks’ FinBB portal	-	http://www.finnbb.fi
GWAS genotype data of BioBank Japan are available at the National Bioscience Database Center Human Database	Nagai et al., 2017	Research ID: hum0014; https://humandbs.biosciencedbc.jp/en/hum0014-v21
UK Biobank data are available through a procedure described at http://www.ukbiobank.ac.uk/using-the-resource/	Bycroft et al., 2018	http://www.ukbiobank.ac.uk/using-the-resource/
The Trøndelag Health Study (HUNT). The HUNT data may be accessed by application to the HUNT Research Centre.	Krokstad et al., 2013	https://www.ntnu.edu/hunt
De-identified data of the MGB Biobank that supports this study is available from the MGB Biobank portal. Restrictions apply to the availability of these data, which are available to MGB-affiliated researchers via a formal application.	Karlson et al., 2016	https://biobank.partners.org/
Estonian Biobank. Researchers interested in Estonian Biobank can request the access at https://www.geenivaramu.ee/en/access-biobank	Leitsalu et al., 2015	https://www.geenivaramu.ee/en/access-biobank
PGS Catalog/LDpred polygenic risk scores	This paper	https://www.pgscatalog.org/ PGS002241–PGS002244
PGS Catalog/PRS-CS polygenic risk score for prostate cancer	This paper	https://www.pgscatalog.org/ PGS002240
PGS Catalog/PRS-CS polygenic risk score for breast cancer	Mars et al., 2020	https://www.pgscatalog.org/ PGS000335
PGS Catalog/PRS-CS polygenic risk score for coronary artery disease and type 2 diabetes	Tamlander et al., 2022	https://www.pgscatalog.org/ PGS001780, PGS001781
Software and algorithms
PRS-CS (version Sep 10, 2020)	Ge et al., 2019	https://github.com/getian107/PRScs
PLINK v2.00a2.3LM	Chang et al., 2015	https://www.cog-genomics.org/plink/2.0/
STEROID 0.1	-	https://genomics.ut.ee/en/tools/steroid
Eagle v2.3.5	Loh P-R et al. 2016	https://alkesgroup.broadinstitute.org/Eagle/
R statistical programming v3.2.0 or later	-	https://www.r-project.org/
LDpred v1.0.7	Vilhjálmsson et al. 2015	https://github.com/bvilhjal/ldpred
Other
PRS-CS pipeline	-	https://github.com/FINNGEN/CS-PRS-pipeline
Project code	This paper	https://doi.org/10.5281/zenodo.6203211