Key resources table
| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Antibodies | ||
| Bacterial and virus strains | ||
| Pst DC13000 wild-type | (Cuppels, 1986) | N/A |
| Pst hopM1 − | (Badel et al. 2003) | CUCPB5368 |
| Pst avrE1 − | (Badel et al. 2006) | CUCPB5374 |
| Pst hopM1 − /avrE1 − | (Badel et al. 2006) | CUCPB5377 |
| Pst hrcC − | (Wei et al. 2000) | N/A |
| Pst DB29 | (Brooks et al. 2004) | N/A |
| Pst avrPtoB | (Lin and Martin, 2005) | N/A |
| Pst D28E + AvrPtoB | (Cunnac et al. 2011) | CUCPB6012 |
| Biological samples | ||
| Promix Premium Potting Mix | PremierTech Inc. | N/A |
| SUREMIX | Michigan Grower Products Inc. | N/A |
| Chemicals, peptides, and recombinant proteins | ||
| Abscisic acid | Millipore-Sigma | CAT#C8115 |
| Coronatine | Millipore-Sigma | CAT#45511 |
| Jasmonic acid | Millipore-Sigma | CAT#14631 |
| Fluridon | Millipore-Sigma | CAT#45511 |
| Water suitable for HPLC | Millipore-Sigma | CAT#270753 |
| Methanol | Millipore-Sigma | CAT#34860 |
| Rhodamine 6G | Millipore-Sigma | CAT#R4127 |
| Formaldehyde | Millipore-Sigma | CAT#252549 |
| Dexamethasone | Millipore-Sigma | CAT#D4902 |
| tert-Butylhydroquinone | Millipore-Sigma | CAT#112941 |
| QIAzol Reagent | QIAGEN | CAT#79306 |
| Advanced Q-PCR Mastermix With Supergreen LO-ROX | Wisent Bioproducts | CAT#800–431-UL |
| SuperScript™ II Reverse Transcriptase | ThermoFisher Sci. | CAT#18064022 |
| Ambion™DNase I (RNase-free) | ThermoFisher Sci. | CAT#AM2222 |
| Jasmonic acid - isoleucine | Cayman Chemical | CAT#10740 |
| Abscisic acid-d6 | Cayman Chemical | CAT#29093 |
| Critical commercial assays | ||
| NEBNext® Multiplex Oligos for Illumina | New England BioLabs | E7335L |
| Deposited data | ||
| GEO Submission (RNA-Seq) | GSE186836 | |
| Experimental models: Cell lines | ||
| Experimental models: Organisms/strains | ||
| A. thaliana: Col-0 wild-type | TAIR | CS70000 |
| A. thaliana: aba2–1 ethylmethane sulfonate mutant | TAIR | CS156 |
| A. thaliana: abcg40 TDNA insertion mutant | TAIR | SALK_148565C |
| A. thaliana: min7 TDNA insertion mutant | (Nomura et al. 2006) | N/A |
| Oligonucleotides | ||
| All primers are listed in Table S3 | N/A | |
| Recombinant DNA | ||
| Software and algorithms | ||
| R statistical environment | https://www.r-project.org/ | N/A |
| CutAdapt | (Martin, 2005) | N/A |
| featureCounts | (Liao et al. 2014) | N/A |
| DESEQ2 | (Love et al. 2014) | N/A |
| Galaxy | (Blankenberg et al. 2010) | N/A |
| PANTHER | (Mi et al. 2013) | N/A |
| REVIGO | (Supek et al. 2011) | N/A |
| Other | ||