Table 1.
Tests performed and positive for PCR detection of respiratory viruses in 2017, 2018, 2019, 2020 and 2021 at Hospital University Institute Méditerranée Infection.
| 2017 |
2018 |
2019 |
2020 |
2021 |
Total 2017-2021 |
2017 |
2018 |
2019 |
2020 |
2021 |
Total2017-2021 |
||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| N | N | N | N | N | N | % | N | % | N | % | N | % | N | % | N | % | |||
| Adenovirus | 5,656 | 14,881 | 17,636 | 32,237 | 5,283 | 75,693 | 160 | 2.8 | 449 | 3.0 | 652 | 3.7 | 600 | 1.9 | 130 | 2.5 | 1,991 | 2.6 | |
| Common coronaviruses | 2,395 | 3,773 | 8,211 | 32,237 | 5,283 | 51,899 | 70 | 2.9 | 110 | 2.9 | 231 | 2.8 | 998 | 3.1 | 276 | 5.2 | 1,685 | 3.2 | |
| HCoV 229E | 2,395 | 3,773 | 8,211 | 11,739 | 5,283 | 31,401 | 0 | 0.0 | 0 | 0.0 | 0 | 0.0 | 84 | 0.7 | 3 | 0.1 | 87 | 0.3 | |
| HCoV HKU1 | 2,395 | 3,773 | 8,211 | 11,736 | 5,283 | 31,398 | 0 | 0.0 | 0 | 0.0 | 0 | 0.0 | 423 | 3.6 | 1 | 0.0 | 424 | 1.4 | |
| HCoV NL63 | 3,791 | 3,773 | 8,211 | 11,739 | 5,283 | 32,797 | 0 | 0.0 | 0 | 0.0 | 0 | 0.0 | 252 | 2.1 | 169 | 3.2 | 421 | 1.3 | |
| HCoV OC43 | 9,007 | 3,773 | 8,211 | 11,74 | 5,283 | 38,014 | 0 | 0.0 | 0 | 0.0 | 0 | 0.0 | 175 | 1.5 | 102 | 1.9 | 277 | 0.7 | |
| Enterovirus | 4,362 | 8,933 | 17,649 | 32,237 | 5,283 | 68,464 | 36 | 0.8 | 164 | 1.8 | 279 | 1.6 | 307 | 1.0 | 4 | 0.1 | 790 | 1.2 | |
| Influenza virus | 12,992 | 14,856 | 17,844 | 32,237 | 5,283 | 83,212 | 1,737 | 13.4 | 1,708 | 11.5 | 2,427 | 13.6 | 3,119 | 9.7 | 0 | 0.0 | 8,991 | 10.8 | |
| Influenza A virus | 12,608 | 14,859 | 17,847 | 32,237 | 5,283 | 82,834 | 1,525 | 12.1 | 936 | 6.3 | 2,397 | 13.4 | 1,686 | 5.2 | 0 | 0.0 | 6,544 | 7.9 | |
| Influenza B virus | 13,088 | 14,858 | 17,847 | 32,237 | 5,283 | 83,313 | 222 | 1.7 | 772 | 5.2 | 30 | 0.2 | 1,435 | 4.5 | 0 | 0.0 | 2,459 | 3.0 | |
| Metapneumovirus | 7,654 | 14,75 | 17,622 | 32,237 | 5,283 | 77,546 | 230 | 3.0 | 325 | 2.2 | 445 | 2.5 | 462 | 1.4 | 20 | 0.4 | 1,482 | 1.9 | |
| Human parainfluenza virus | 9,007 | 3,771 | 8,268 | 32,237 | 5,283 | 58,566 | 15 | 0.2 | 200 | 5.3 | 438 | 5.3 | 129 | 0.4 | 322 | 6.1 | 1,104 | 1.9 | |
| HPIV1 | 3,791 | 3,771 | 8,268 | 9,268 | 5,283 | 30,381 | 0 | 0.0 | 0 | 0.0 | 0 | 0.0 | 9 | 0.1 | 0 | 0.0 | 9 | 0.0 | |
| HPIV2 | 3,791 | 3,771 | 8,268 | 9,268 | 5,283 | 30,381 | 0 | 0.0 | 0 | 0.0 | 0 | 0.0 | 17 | 0.2 | 1 | 0.0 | 18 | 0.1 | |
| HPIV3 | 2,395 | 3,771 | 8,268 | 9,268 | 5,283 | 28,985 | 0 | 0.0 | 0 | 0.0 | 0 | 0.0 | 41 | 0.4 | 299 | 5.7 | 340 | 1.2 | |
| HPIV4 | 2,395 | 3,771 | 8,268 | 9,268 | 5,283 | 28,985 | 0 | 0.0 | 0 | 0.0 | 0 | 0.0 | 48 | 0.5 | 20 | 0.4 | 68 | 0.2 | |
| Rhinovirus | 4,305 | 14,057 | 17,637 | 32,237 | 5,283 | 73,519 | 401 | 9.3 | 1,771 | 12.6 | 2,264 | 12.8 | 2,494 | 7.7 | 449 | 8.5 | 7,379 | 10.0 | |
| Respiratory syncytial virus | 12,756 | 14,849 | 17,851 | 32,237 | 5,283 | 82,976 | 923 | 7.2 | 1,024 | 6.9 | 1,347 | 7.5 | 498 | 1.5 | 54 | 1.0 | 3,846 | 4.6 | |
| SARS-CoV-2 | 0 | 0 | 0 | 420,120 | 90,551 | 510,671 | 0 | 0 | 0 | 0 | 0 | 0 | 26,723 | 6.4 | 8,236 | 9.1 | 34,959 | 6.8 | |
HCoV, human coronavirus; HPIV, human parainfluenza virus; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2