Table 1.
UniProt ID | Gene | Protein name | Conditions (A–D) |
p-value |
||||||
---|---|---|---|---|---|---|---|---|---|---|
(A) 5 mM Glc | (B) 0 mM Glc | (C) 2.5 mM Lac | (D) 5 mM Glc + 2.5 mM Lac |
A vs. B | A vs. C | A vs. D |
||||
I | Trypsin digestion control | |||||||||
TRYP_PIG | LOC100302368 | Trypsin (EC 3.4.21.4) $ | 48.4 ± 12.3 | 55.4 ± 3.9 | 55 ± 10.3 | 46 ± 6.2 | 0.49 | 0.52 | 0.81 | |
II | Astrocyte characterization | |||||||||
GFAP_RAT | Gfap | Glial fibrillary acidic protein, GFAP | 194.7 ± 40.3 | 186.3 ± 21.8 | 213.9 ± 31.7 | 204 ± 61.6 | 0.67 | 0.34 | 0.64 | |
GLNA_RAT | Glul | Glutamine synthetase # | 12.1 ± 10.3 | 13.1 ± 4.8 | 9.1 ± 3.5 | 9.5 ± 9.1 | 0.85 | 0.52 | 0.57 | |
AL1A1_RAT | Aldh1a1 | Retinal dehydrogenase 1 | 4.4 ± 0.7 | 4.0 ± 0.4 | 4.7 ± 2.3 | 4.4 ± 1.8 | 0.88 | 0.93 | 0.99 | |
NDRG2_RAT | Ndrg2 | Protein NDRG2 | 6.2 ± 3.2 | 4.1 ± 0.4 | 5.1 ± 0.9 | 5.6 ± 0.0 | 0.529 | 0.758 | 0.877 | |
RAB6A_RAT | Rab6a | Ras-related protein, Rab-6A # | 6.2 ± 1.7 | 5.3 ± 0.6 | 6.0 ± 2.6 | 7.6 ± 3.0 | 0.79 | 0.95 | 0.70 | |
EAA1_RAT | Slc1a3 | Excitatory amino acid transporter 1, EAAT1 # | 21.9 ± 9.9 | 29.4 ± 7.1 | 26.5 ± 3.6 | 22.0 ± 9.0 | 0.29 | 0.51 | 0.99 | |
CXA1_RAT | Gja1 | Gap junction alpha-1 protein, connexin 43 | 2.9 ± 0.8 | 6.2 ± 1.6 | 3.7 ± 0.3 | 4.7 ± 0.9 | 0.256 | 0.735 | 0.506 | |
AQP4_RAT | Aqp4 | Aquaporin-4 | 4.1 ± 1.5 | 3.9 ± 1.2 | 5.1 ± 0.4 | 4.2 ± 1.4 | 0.939 | 0.748 | 0.966 | |
NEST_RAT | Nes | Nestin | 17.3 ± 11.1 | 13.3 ± 7.3 | 19.1 ± 7.4 | 19.3 ± 11.7 | 0.475 | 0.762 | 0.740 | |
TBB3_RAT | Tubb3 | Tubulin beta-3 chain | 90.2 ± 14.4 | 76.5 ± 14.5 | 93.5 ± 6.7 | 97.3 ± 20.1 | 0.287 | 0.810 | 0.608 | |
VIME_RAT | Vim | Vimentin | 857.3 ± 180.5 | 871.4 ± 29.1 | 992.8 ± 31.9 | 898.1 ± 179.4 | 0.733 | 0.002 * | 0.330 | |
III | Cytoskeleton (also see ad II for GFAP, nestin, beta-3 tubulin and vimentin) | |||||||||
PLEC_RAT | Plec | Plectin | 121 ± 30.6 | 142.4 ± 65.6 | 107.0 ± 36.8 | 80.2 ± 53.6 | 0.187 | 0.355 | 0.004 * | |
1433E_RAT | Ywhae | 14–3-3 protein epsilon | 34.8 ± 8.9 | 31.0 ± 7.0 | 49.9 ± 5.3 | 44.4 ± 6.8 | 0.636 | 0.1 | 0.279 | |
ACTG_RAT | Actg1 | Actin, cytoplasmic 2 (gamma) | 482.2 ± 90.7 | 416.3 ± 79.2 | 390.9 ± 33.2 | 466.1 ± 121.0 | 0.028 * | 0.002 * | 0.601 | |
ACTC_RAT | Actc1 | Actin, alpha cardiac muscle 1 | 268.9 ± 21.8 | 266.1 ± 13.5 | 232.9 ± 14.5 | 289.4 ± 55.4 | 0.906 | 0.108 | 0.386 | |
ACTN1_RAT | Actn1 | Alpha-actinin-1 | 175.7 ± 16.0 | 129.1 ± 19.8 | 145.2 ± 4.8 | 169.7 ± 26.4 | 0.008 * | 0.089 | 0.745 | |
ACTN4_RAT | Actn4 | Alpha-actinin-4 | 150.7 ± 17.6 | 102.4 ± 18.6 | 115.7 ± 6.5 | 135.9 ± 24.2 | 0.002 * | 0.031 * | 0.379 | |
DREB_RAT | Dbn1 | Drebrin | 5.4 ± 2.9 | 3.5 ± 1.7 | 4.1 ± 1.0 | 5.2 ± 2.1 | 0.514 | 0.667 | 0.932 | |
EZRI_RAT | Ezr | Ezrin | 29.0 ± 6.4 | 43.2 ± 5.9 | 32.6 ± 11.9 | 30.4 ± 1.3 | 0.094 | 0.648 | 0.864 | |
MOES_RAT | Msn | Moesin | 52.0 ± 13.7 | 73.0 ± 9.0 | 53.3 ± 9.9 | 64.7 ± 7.5 | 0.059 | 0.902 | 0.238 | |
RAC1_RAT | Rac1 | Ras-related C3 botulinum toxin substrate 1 | 11.3 ± 0.6 | 9.8 ± 0.8 | 11.0 ± 0.8 | 9.0 ± 0.9 | 0.744 | 0.958 | 0.621 | |
ROCK2_RAT | Rock2 | Rho-associated protein kinase 2 | 6.4 ± 1.4 | 4.8 ± 1.2 | 3.4 ± 1.0 | 12.3 ± 6.8 | 0.625 | 0.340 | 0.168 | |
MYH9_RAT | Myh9 | Myosin-9 | 251.6 ± 62.2 | 213.5 ± 63.7 | 261.1 ± 36.6 | 245.8 ± 30.2 | 0.078 | 0.674 | 0.795 | |
MYH10_RAT | Myh10 | Myosin-10 | 171.2 ± 26.6 | 154.0 ± 39.0 | 182.1 ± 9.2 | 167.9 ± 23.6 | 0.341 | 0.563 | 0.859 | |
TPM1_RAT | Tpm1 | Tropomyosin alpha-1 chain | 46.8 ± 7.5 | 36.0 ± 5.6 | 43.8 ± 4.3 | 54.1 ± 5.7 | 0.238 | 0.755 | 0.463 | |
TPM2_RAT | Tpm2 | Tropomyosin beta chain | 35.7 ± 3.3 | 26.5 ± 1.2 | 29.9 ± 0.5 | 30.5 ± 2.6 | 0.244 | 0.474 | 0.524 | |
TPM3_RAT | Tpm3 | Tropomyosin alpha-3 chain | 30.3 ± 2.0 | 23.3 ± 5.8 | 28.0 ± 3.5 | 32.1 ± 3.0 | 0.341 | 0.763 | 0.816 | |
TPM4_RAT | Tpm4 | Tropomyosin alpha-4 chain | 34.4 ± 6.5 | 26.3 ± 7.6 | 34.2 ± 3.5 | 38.9 ± 0.1 | 0.292 | 0.972 | 0.607 | |
FINC_RAT | Fn1 | Fibronectin | 35.3 ± 27.6 | 15.8 ± 8.2 | 15.8 ± 3.1 | 28.5 ± 18.6 | 0.006 * | 0.006 * | 0.395 | |
VINC_RAT | Vcl | Vinculin | 88.9 ± 9.8 | 60.3 ± 6.7 | 71.6 ± 2.4 | 66.5 ± 11.0 | 0.019 * | 0.173 | 0.073 | |
CADH2_RAT | Cdh2 | Cadherin-2 | 14.9 ± 2.8 | 19.9 ± 5.8 | 13.6 ± 2.7 | 14.1 ± 1.3 | 0.391 | 0.815 | 0.891 | |
ICAM1_RAT | Icam1 | Intercellular adhesion molecule 1 | 4.8 ± 1.7 | 5.3 ± 2.0 | 5.2 ± 2.5 | 5.9 ± 1.5 | 0.875 | 0.911 | 0.756 | |
ARC1A_RAT | Arpc1a | Actin-related protein 2/3 complex subunit 1A | 2.5 ± 0.5 | 3.0 ± 0.5 | 2.2 ± 0.6 | 3.3 ± 0.5 | 0.826 | 0.925 | 0.729 | |
ARPC2_RAT | Arpc2 | Actin-related protein 2/3 complex subunit 2 | 14.9 ± 1.9 | 15.9 ± 2.3 | 6.8 ± 2.6 | 14.2 ± 2.0 | 0.847 | 0.077 | 0.902 | |
ARP2_RAT | Actr2 | Actin-related protein 2 | 15.1 ± 2.9 | 12.7 ± 2.6 | 13.1 ± 2.3 | 16.6 ± 2.0 | 0.649 | 0.698 | 0.795 | |
ARP3_RAT | Actr3 | Actin-related protein 3 | 28.6 ± 5.0 | 27.5 ± 1.0 | 23.1 ± 2.1 | 29.1 ± 3.6 | 0.893 | 0.448 | 0.947 | |
CAZA1_RAT | Capza1 | F-actin-capping protein subunit alpha-1 | 6.6 ± 1.3 | 4.7 ± 1.7 | 5.5 ± 0.8 | 6.6 ± 1.4 | 0.568 | 0.754 | 0.984 | |
CAZA2_RAT | Capza2 | F-actin-capping protein subunit alpha-2 | 6.8 ± 1.5 | 5.3 ± 1.8 | 4.9 ± 1.0 | 7.0 ± 1.6 | 0.660 | 0.566 | 0.958 | |
CAPZB_RAT | Capzb | F-actin-capping protein subunit beta | 11.0 ± 1.6 | 8.6 ± 2.0 | 9.2 ± 1.2 | 10.4 ± 3.7 | 0.586 | 0.689 | 0.897 | |
GELS_RAT | Gsn | Gelsolin | 5.1 ± 0.9 | 3.5 ± 1.8 | 6.3 ± 1.9 | 6.0 ± 2.2 | 0.591 | 0.717 | 0.783 | |
PROF1_RAT | Pfn1 | Profilin-1 | 29.6 ± 8.0 | 17.0 ± 8.9 | 27.0 ± 9.7 | 28.6 ± 3.6 | 0.063 | 0.725 | 0.897 | |
SEPT2_RAT | Sept.2 | Septin-2 | 22.7 ± 0.3 | 24.6 ± 5.6 | 23.0 ± 0.9 | 20.5 ± 1.2 | 0.782 | 0.976 | 0.732 | |
SEPT7_RAT | Sept.7 | Septin-7 | 25.9 ± 0.9 | 27.6 ± 6.1 | 22.2 ± 2.7 | 20.4 ± 4.0 | 0.818 | 0.588 | 0.416 | |
SEPT8_RAT | Sept.8 | Septin-8 | 8.9 ± 1.1 | 8.3 ± 1.2 | 9.0 ± 0.3 | 7.5 ± 0.9 | 0.892 | 0.972 | 0.732 | |
SEPT9_RAT | Sept.9 | Septin-9 | 11.5 ± 1.8 | 13.0 ± 2.3 | 8.7 ± 1.2 | 11.9 ± 4.5 | 0.754 | 0.537 | 0.940 | |
SEP11_RAT | Sept.11 | Septin-11 | 24.9 ± 2.5 | 21.1 ± 3.7 | 20.1 ± 3.6 | 20.7 ± 2.5 | 0.572 | 0.472 | 0.535 | |
TBA1A_RAT | Tuba1a | Tubulin alpha-1A chain | 125.2 ± 20.7 | 96 ± 11.7 | 120.3 ± 7.3 | 114.7 ± 17.8 | 0.050 * | 0.754 | 0.499 | |
TBA1B_RAT | Tuba1b | Tubulin alpha-1B chain | 125.6 ± 14.8 | 82.4 ± 3.4 | 105.3 | 109.9 ± 15.1 | 0.003 * | NA | 0.305 | |
TBA4A_RAT | Tuba4a | Tubulin alpha-4A chain | 100.3 ± 10.5 | 67.7 ± 8.5 | 90.7 ± 8.1 | 94.4 ± 18.0 | 0.012 * | 0.491 | 0.676 | |
TBB2B_RAT | Tubb2b | Tubulin beta-2B chain | 148.6 ± 20.9 | 128.4 ± 26.9 | 149.2 ± 13.4 | 146.3 ± 32.3 | 0.224 | 0.971 | 0.894 | |
TBB4B_RAT | Tubb4b | Tubulin beta-4B chain | 133.4 ± 15.2 | 119.6 ± 21.2 | 136.1 ± 11.1 | 139.2 ± 28.2 | 0.386 | 0.868 | 0.727 | |
TBB5_RAT | Tubb5 | Tubulin beta-5 chain | 142.2 ± 16.6 | 124.6 ± 23.7 | 145.0 ± 10.6 | 146 ± 26.8 | 0.279 | 0.873 | 0.827 | |
MACF1_RAT | Macf1 | Microtubule-actin cross-linking factor | 2.9 ± 0.8 | 5.7 ± 4.9 | 4.5 ± 2.3 | 7.0 | 0.332 | 0.543 | NA | |
MAP1A_RAT | Map1a | Microtubule-associated protein 1A | 5.1 ± 0.2 | 5.1 ± 2.8 | 4.3 ± 0.3 | 5.6 ± 2.0 | 0.995 | 0.811 | 0.882 | |
ACTZ_RAT | Actr1a | Alpha-centractin | 8.7 ± 1.4 | 9.5 ± 1.0 | 9.4 ± 1.1 | 8.3 ± 2.2 | 0.866 | 0.870 | 0.920 | |
IV | Secretory organelle/vesicle trafficking | |||||||||
MYO1C_RAT | Myo1c | Unconventional myosin-Ic | 33.3 ± 9.4 | 27.1 ± 12.8 | 18.5 ± 5.5 | 21.8 ± 8.9 | 0.421 | 0.037 * | 0.118 | |
MYO1D_RAT | Myo1d | Unconventional myosin-Id | 6.4 ± 1.4 | 7.2 ± 1.6 | 5.4 | 3.9 ± 1.6 | 0.821 | NA | 0.443 | |
MYO1E_RAT | Myo1e | Unconventional myosin-Ie | 7.8 ± 2.1 | 5.9 ± 3.3 | 5.0 ± 1.9 | 4.1 ± 1.2 | 0.619 | 0.431 | 0.282 | |
DYHC1_RAT | Dync1h1 | Cytoplasmic dynein 1 heavy chain 1 | 59.8 ± 9.8 | 50.3 ± 31.1 | 41.3 ± 9.1 | 40.1 ± 15.5 | 0.366 | 0.065 | 0.048 * | |
DC1I2_RAT | Dync1i2 | Cytoplasmic dynein 1 intermediate chain 2 | 3.0 ± 0.8 | 3.9 ± 1.1 | 6.2 | 3.4 ± 0.8 | 0.741 | NA | 0.866 | |
DC1L2_RAT | Dync1li2 | Cytoplasmic dynein 1 light intermediate chain 2 | 4.3 ± 1.3 | 4.8 ± 1.9 | 4.8 ± 0.9 | 4.8 ± 2.1 | 0.881 | 0.883 | 0.881 | |
KINH_RAT | Kif5b | Kinesin-1 heavy chain | 11.6 ± 4.7 | 10.3 ± 1.3 | 8.7 ± 3.2 | 10.2 ± 5.3 | 0.795 | 0.524 | 0.762 | |
KLC1_RAT | Klc1 | Kinesin light chain 1 | 4.6 ± 0.4 | 4.4 ± 0.8 | 2.7 ± 0.3 | 4.8 ± 1.7 | 0.936 | 0.467 | 0.960 | |
RAB7A_RAT | Rab7a | Ras-related protein Rab-7a | 11.6 ± 1.4 | 11.3 ± 2.5 | 11.7 ± 1.4 | 11.4 ± 1.7 | 0.948 | 0.986 | 0.970 | |
RAB31_RAT | Rab31 | Ras-related protein Rab-31 | 4.1 ± 1.0 | 4.4 ± 1.8 | 5.8 ± 0.7 | 5.0 ± 0.9 | 0.904 | 0.592 | 0.759 | |
V | Secretory organelle/vesicle recycling | |||||||||
RAB6A_RAT | Rab6a | Ras-related protein, Rab-6A # | 6.2 ± 1.7 | 5.3 ± 0.6 | 6.0 ± 2.6 | 7.6 ± 3.0 | 0.79 | 0.95 | 0.70 | |
SC22B_RAT | Sec22b | Vesicle-trafficking protein SEC22b | 6.1 ± 0.6 | 8.9 ± 2.7 | 8.1 ± 2.6 | 5.3 ± 1.9 | 0.463 | 0.580 | 0.825 | |
USO1_RAT | Uso1 | General vesicular transport factor p115 | 5.7 ± 2.1 | 2.7 ± 0.7 | 4.7 ± 2.5 | 3.2 ± 1.3 | 0.291 | 0.765 | 0.410 | |
RB11B_RAT | Rab11b | Ras-related protein, Rab-11B | 8.0 ± 3.1 | 6.5 ± 1.6 | 9.5 ± 1.0 | 8.1 ± 1.3 | 0.703 | 0.720 | 0.976 | |
STX12_RAT | Stx12 | Syntaxin 12 | 3.3 ± 0.9 | 4.4 ± 0.1 | 3.2 ± 0.1 | 3.5 ± 0.6 | 0.69 | 0.96 | 0.95 | |
VAMP2_RAT | Vamp2 | VAMP2/synaptobrevin 2 | 2.4 | 3.5 | ND | 2.3 | NA | NA | NA | |
VAMP3_RAT | Vamp3 | VAMP3/cellulbrevin | 4 ± 1.0 | 5.9 ± 0.4 | 3.3 ± 1.5 | 4 ± 0.2 | 0.54 | 0.80 | 0.99 | |
VAMP7_RAT | Vamp7 | Vesicle-associated membrane protein 7 | ND | 1.8 ± 0.0 | ND | ND | NA | NA | NA | |
LAMP1_RAT | Lamp1 | Lysosome-associated membrane glycoprotein 1 | 8.2 ± 2.0 | 7.4 ± 2.4 | 7.0 ± 0.6 | 9.4 ± 2.4 | 0.852 | 0.754 | 0.765 | |
VATB2_RAT | Atp6v1b2 | V-type proton ATPase subunit B, brain isoform | 4.7 ± 0.6 | 5.9 ± 1.1 | 5.5 ± 1.3 | 4.7 ± 1.4 | 0.72 | 0.83 | 0.99 | |
SCRN1_RAT | Scrn1 | Secernin-1 | 7.4 ± 3.8 | 6.2 ± 0.6 | 11.5 ± 2.6 | 15.7 ± 0.4 | 0.751 | 0.337 | 0.080 | |
SNAA_RAT | Napa | Alpha-soluble NSF attachment protein | 3.4 ± 1.4 | 2.6 ± 0.0 | 2.4 ± 0.8 | 2.3 ± 0.4 | 0.745 | 0.667 | 0.638 | |
CAV1_RAT | Cav1 | Caveolin-1 | 8.2 ± 2.0 | 8.9 ± 2.6 | 8.2 ± 2.5 | 7.7 ± 1.5 | 0.855 | 0.999 | 0.912 | |
CLH1_RAT | Cltc | Clathrin heavy chain 1 | 47.2 ± 22.2 | 69.0 ± 20.6 | 77.2 ± 5.6 | 77.1 ± 4.4 | 0.043 * | 0.007 * | 0.007 * | |
AP2M1_RAT | Ap2m1 | AP-2 complex subunit mu | 9.6 ± 2.2 | 12.1 ± 2.7 | 10.4 ± 0.8 | 9.8 ± 2.2 | 0.587 | 0.848 | 0.951 | |
DYN2_RAT | Dnm2 | Dynamin-2 | 5.9 ± 2.0 | 5.9 ± 3.7 | 6.8 ± 2.9 | 5.4 ± 1.1 | 0.997 | 0.799 | 0.880 | |
ANXA1_RAT | Anxa1 | Annexin A1 | 50.1 ± 10.4 | 32.4 ± 8.0 | 57.2 ± 6.8 | 56.3 ± 11.1 | 0.050 * | 0.494 | 0.554 | |
ANXA2_RAT | Anxa2 | Annexin A2 | 79.8 ± 8.6 | 67.4 ± 5.6 | 82.0 ± 7.7 | 89.2 ± 8.6 | 0.306 | 0.860 | 0.470 | |
ANXA4_RAT | Anxa4 | Annexin A4 | 4.6 ± 0.8 | 2.1 ± 0.4 | 2.9 ± 0.4 | 3.6 ± 1.5 | 0.316 | 0.516 | 0.724 | |
ANXA6_RAT | Anxa6 | Annexin A6 | 39.8 ± 4.3 | 28.0 ± 9.7 | 38.5 ± 9.7 | 53.1 ± 5.5 | 0.150 | 0.884 | 0.168 | |
VI | Calcium dynamics | |||||||||
AT2A2_RAT | Atp2a2 | Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 | 24 ± 2.5 | 22 ± 5.3 | 16.7 ± 1.9 | 17 ± 4.7 | 0.77 | 0.25 | 0.27 | |
ITPR2_RAT | Itpr2 | Inositol 1,4,5-trisphosphate receptor, type 2 | ND | 1.8 | 2.2 | ND | NA | NA | NA | |
REVERSE_RYR2_RAT-DECOY | Ryr2 | Ryanodine receptor 2 | 1.9 | ND | ND | ND | NA | NA | NA | |
NAC1_RAT | Slc8a1 | Sodium/calcium exchanger 1 | ND | 1.8 | ND | ND | NA | NA | NA | |
STIM1_RAT | Stim1 | Stromal interaction molecule 1 | ND | 1.8 | ND | ND | NA | NA | NA | |
ESYT1_RAT | Esyt1 | Extended synaptotagmin-1 | 13.6 ± 5.4 | 9.6 ± 5.0 | 6.8 ± 2.1 | 8.5 ± 4.6 | 0.40 | 0.13 | 0.28 | |
VDAC1_RAT | Vdac1 | Voltage-dependent anion-selective channel protein 1 | 28.3 ± 1.9 | 34.8 ± 7.0 | 24.7 ± 4.1 | 29.7 ± 8.8 | 0.419 | 0.614 | 0.863 | |
VDAC2_RAT | Vdac2 | Voltage-dependent anion-selective channel protein 2 | 14.1 ± 2.3 | 17.8 ± 2.2 | 10.3 ± 2.7 | 11.7 ± 2.3 | 0.51 | 0.43 | 0.63 | |
VDAC3_RAT | Vdac3 | Voltage-dependent anion-selective channel protein 3 | 12.1 ± 2.5 | 16.9 ± 1.7 | 12.0 ± 0.9 | 12.0 ± 1.9 | 0.372 | 0.983 | 0.979 | |
NAC1_RAT | Slc8a1 | Sodium/calcium exchanger 1, NCLX | ND | 1.8 | ND | ND | NA | NA | NA | |
MPCP_RAT | Slc25a3 | Phosphate carrier protein, mitochondrial | 19.3 ± 4.0 | 23.7 ± 2.1 | 18.2 ± 0.2 | 20.6 ± 5.7 | 0.504 | 0.847 | 0.845 | |
ADT2_RAT | Slc25a5 | ADP/ATP translocase 2 | 25.7 ± 2.6 | 28.5 ± 3.8 | 23.9 ± 2.8 | 25.9 ± 7.0 | 0.703 | 0.795 | 0.975 | |
VII | Metabolism | |||||||||
Glucose transport | ||||||||||
GTR1_RAT | Slc2a1 | Solute carrier family 2, facilitated glucose transporter member 1 | 8.4 ± 1.8 | 2.6 | 6.9 ± 0.8 | 7.7 ± 0.8 | NA | 0.71 | 0.85 | |
Lactate transport | ||||||||||
MOT1_RAT | Slc16a1 | Monocarboxylate transporter 1 | 6.5 ± 1.9 | 8.0 ± 2.0 | 5.2 ± 1.8 | 5.8 ± 2.0 | 0.69 | 0.72 | 0.85 | |
Glutamate metabolism | ||||||||||
EAA1_RAT | Slc1a3 | Excitatory amino acid transporter 1, EAAT1 # | 21.9 ± 9.9 | 29.4 ± 7.1 | 26.5 ± 3.6 | 22 ± 9.0 | 0.29 | 0.51 | 0.99 | |
GLNA_RAT | Glul | Glutamine synthetase # | 12.1 ± 10.3 | 13.1 ± 4.8 | 9.1 ± 3.5 | 9.5 ± 9.1 | 0.85 | 0.52 | 0.57 | |
DHE3_RAT | Glud1 | Glutamate dehydrogenase 1, mitochondrial | 28 ± 3.6 | 31.8 ± 7.3 | 28.6 ± 3.1 | 32.6 ± 3.0 | 0.62 | 0.94 | 0.55 | |
Glucose phosphorylation | ||||||||||
HXK1_RAT | Hk1 | Hexokinase-1 | 50.5 ± 2.5 | 49.9 ± 9.6 | 50.1 ± 6.2 | 43.4 ± 2.4 | 0.95 | 0.97 | 0.46 | |
Glycolysis | ||||||||||
G6PI_RAT | Gpi | Glucose-6-phosphate isomerase | 25.2 ± 0.7 | 20.4 ± 4.0 | 34.7 ± 3.4 | 30.4 ± 4.0 | 0.48 | 0.22 | 0.48 | |
K6PF_RAT | Pfkm | 6-phosphofructokinase, muscle type | 6.7 ± 1.0 | 9.5 ± 2.4 | 11.1 ± 3.3 | 13.9 ± 5.0 | 0.49 | 0.30 | 0.11 | |
K6PL_RAT | Pfkl | 6-phosphofructokinase, liver type | 8.8 ± 1.7 | 8.0 ± 2.7 | 12.8 ± 5.6 | 11.2 ± 5.0 | 0.84 | 0.39 | 0.60 | |
ALDOA_RAT | Aldoa | Fructose-bisphosphate aldolase A | 57.1 ± 10.7 | 58.5 ± 5.7 | 48.9 ± 4.3 | 55.0 ± 1.8 | 0.90 | 0.43 | 0.84 | |
TPIS_RAT | Tpi1 | Triosephosphate isomerase | 19.3 ± 4.3 | 12.7 ± 1.3 | 20.8 ± 6.0 | 20.3 ± 0.5 | 0.25 | 0.80 | 0.87 | |
G3P_RAT | Gapdh | Glyceraldehyde-3-phosphate dehydrogenase, GAPDH | 157.0 ± 10.0 | 135.5 ± 6.3 | 147.5 ± 27.5 | 149.6 ± 13.6 | 0.21 | 0.59 | 0.68 | |
PGK1_RAT | Pgk1 | Phosphoglycerate kinase 1 | 31.1 ± 6.6 | 24.5 ± 4.1 | 32.0 ± 1.6 | 28.6 ± 8.0 | 0.38 | 0.90 | 0.75 | |
PGM1_RAT | Pgm1 | Phosphoglucomutase-1 | 10.8 ± 7.0 | 13.5 ± 5.2 | 19.1 ± 7.1 | 14.8 ± 3.3 | 0.58 | 0.13 | 0.43 | |
ENOA_RAT | Eno1 | Alpha-enolase | 83.8 ± 16.2 | 64.5 ± 19.7 | 98.2 ± 6.9 | 80.8 ± 17.3 | 0.11 | 0.28 | 0.82 | |
KPYM_RAT | Pkm | Pyruvate kinase PKM | 74.2 ± 6.9 | 57.1 ± 16.0 | 85.5 ± 16.6 | 78.8 ± 16.7 | 0.14 | 0.37 | 0.71 | |
LDHA_RAT | Ldha | L-lactate dehydrogenase A chain | 72.8 ± 9.3 | 58.7 ± 12.7 | 71.1 ± 14.4 | 75.5 ± 16.0 | 0.22 | 0.88 | 0.83 | |
LDHB_RAT | Ldhb | L-lactate dehydrogenase B chain | 26.3 ± 1.4 | 23.9 ± 5.3 | 32.1 ± 2.9 | 34.6 ± 6.8 | 0.74 | 0.44 | 0.28 | |
Pyruvate conversion | ||||||||||
PYC_RAT | Pc | Pyruvate carboxylase, mitochondrial | 10.4 ± 4.3 | 10.7 ± 7.1 | 7.8 ± 2.0 | 4.0 ± 2.1 | 0.94 | 0.54 | 0.09 | |
ODPB_RAT | Pdhb | Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | 14.8 ± 0.2 | 10.1 ± 0.6 | 8.3 ± 0.7 | 12.7 ± 2.7 | 0.342 | 0.176 | 0.682 | |
TCA cycle | ||||||||||
CISY_RAT | Cs | Citrate synthase, mitochondrial | 18.5 ± 4.0 | 19.9 ± 4.0 | 14.1 ± 1.4 | 12.2 ± 1.4 | 0.82 | 0.44 | 0.25 | |
ACON_RAT | Aco2 | Aconitate hydratase, mitochondrial | 27.8 ± 3.1 | 33.2 ± 3.5 | 28.3 ± 3.9 | 30.0 ± 3.9 | 0.49 | 0.95 | 0.78 | |
IDHP_RAT | Idh2 | Isocitrate dehydrogenase [NADP], mitochondrial | 26.9 ± 5.4 | 33.0 ± 4.6 | 25.9 ± 4.3 | 22.2 ± 3.4 | 0.43 | 0.89 | 0.50 | |
IDH3A_RAT | Idh3A | Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial | 11.9 ± 2.8 | 13.9 ± 2.5 | 14.4 ± 6.6 | 13.6 ± 1.7 | 0.69 | 0.62 | 0.73 | |
IDH3B_RAT | Idh3B | Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial | 4.3 ± 0.5 | 4.8 ± 1.2 | 3.7 ± 0.3 | 4.5 ± 1.7 | 0.88 | 0.96 | 0.96 | |
ODO1_RAT | Ogdh | 2-oxoglutarate dehydrogenase, mitochondrial | 12.5 ± 6.1 | 18.7 ± 4.3 | 11.6 ± 2.8 | 9.5 ± 2.2 | 0.27 | 0.85 | 0.52 | |
SUCA_RAT | Suclg1 | Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial | 4.9 ± 1.3 | 3.9 ± 1.9 | 3.8 ± 1.6 | 3.8 ± 0.3 | 0.74 | 0.71 | 0.71 | |
DHSA_RAT | Sdha | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | 10.3 ± 2.4 | 10.7 ± 0.9 | 7.9 ± 0.7 | 11.0 ± 1.9 | 0.94 | 0.57 | 0.89 | |
MDHM_RAT | Mdh2 | Malate dehydrogenase, mitochondrial # | 44.5 ± 6.4 | 40.0 ± 4.6 | 39.3 ± 8.7 | 47.8 ± 9.4 | 0.63 | 0.57 | 0.73 | |
Malate shuttle | ||||||||||
AATC_RAT | Got1 | Aspartate aminotransferase, cytoplasmic | ND | ND | 2.0 ± 0.3 | ND | NA | NA | NA | |
MDHC_RAT | Mdh1 | Malate dehydrogenase, cytoplasmic | 21.8 ± 1.3 | 16.5 ± 2.4 | 22.2 ± 2.2 | 22.7 ± 2.9 | 0.40 | 0.95 | 0.89 | |
MDHM_RAT | Mdh2 | Malate dehydrogenase, mitochondrial # | 44.0 ± 6.4 | 40.0 ± 4.6 | 39.0 ± 8.7 | 47.8 ± 9.4 | 0.63 | 0.57 | 0.73 | |
AATM_RAT | Got2 | Aspartate aminotransferase, mitochondrial | 20.9 ± 0.8 | 26.7 ± 1.9 | 20.2 ± 1.2 | 23.7 ± 2.0 | 0.40 | 0.92 | 0.68 | |
MAOX_RAT | Me1 | NADP-dependent malic enzyme | 5.2 ± 1.2 | 5.7 ± 3.9 | 8.4 ± 2.3 | 6.8 ± 2.6 | 0.888 | 0.383 | 0.641 | |
Glycogenesis | ||||||||||
PGM1_RAT | Pgm1 | Phosphoglucomutase-1 | 10.8 ± 7.0 | 13.5 ± 5.2 | 19.1 ± 7.1 | 14.8 ± 3.3 | 0.58 | 0.13 | 0.43 | |
UGGG1_RAT Uggt1 | UDP-glucose:glycoprotein glucosyltransferase 1 | 7.8 ± 2.8 | 9.8 ± 3.7 | 7.3 ± 1.5 | 12.9 ± 6.1 | 0.65 | 0.89 | 0.26 | ||
GYS1_RAT | Gys1 | Glycogen synthase | ND | 1.7 | ND | ND | NA | NA | NA | |
Glycogenolysis | ||||||||||
PYGB_RAT | Pygb | Glycogen phosphorylase, brain form (Fragment) | 39.7 ± 4.4 | 24.5 ± 8.4 | 33.3 ± 8.5 | 34.6 ± 5.1 | 0.06 | 0.45 | 0.55 | |
Pentose phosphate pathway | ||||||||||
G6PD_RAT | G6pdx | Glucose-6-phosphate 1-dehydrogenase | 13.9 ± 2.2 | 10.8 ± 7.0 | 18.6 ± 6.8 | 16.5 ± 3.7 | 0.53 | 0.41 | 0.65 | |
6PGD_RAT | Pgd | 6-phosphogluconate dehydrogenase, decarboxylating | 22.2 ± 2.1 | 20.4 ± 2.4 | 18.6 ± 4.0 | 17.1 ± 1.9 | 0.78 | 0.57 | 0.42 | |
TALDO_RAT | Taldo1 | Transaldolase | 11.4 ± 2.4 | 8.5 ± 3.5 | 12.6 ± 2.5 | 9.7 ± 4.0 | 0.52 | 0.80 | 0.72 | |
TKT_RAT | Tkt | Transketolase | 23.6 ± 4.8 | 26.9 ± 4.3 | 28.2 ± 3.0 | 25.7 ± 2.0 | 0.64 | 0.52 | 0.76 | |
Fatty acid metabolism | ||||||||||
ACLY_RAT | Acly | ATP-citrate synthase | 24.9 ± 7.8 | 21.4 ± 4.0 | 22.7 ± 1.5 | 18.0 ± 5.9 | 0.61 | 0.75 | 0.29 | |
FAS_RAT | Fasn | Fatty acid synthase | 17.5 ± 9.1 | 28.7 ± 4.5 | 34.9 ± 13.8 | 16.4 ± 10.7 | 0.10 | 0.015 * | 0.85 | |
VIII | Transcription | |||||||||
SND1_RAT | Snd1 | Staphylococcal nuclease domain-containing protein 1 | 28.7 ± 7.3 | 24.6 ± 1.5 | 23.6 ± 5.2 | 15.2 ± 2.0 | 0.570 | 0.483 | 0.040 * | |
U520_RAT | Snrnp200 | U5 small nuclear ribonucleoprotein 200 kDa helicase | 3.0 ± 1.0 | 12.5 ± 8.2 | 6.0 ± 1.9 | 5.2 ± 2.4 | 0.012 * | 0.309 | 0.436 | |
HDAC1_RAT | Hdac1 | Histone deacetylase 1 | 3.0 ± 1.0 | 3.9 ± 1.1 | 2.9 ± 1.5 | 4.5 ± 1.1 | 0.734 | 0.985 | 0.574 |
Classification categories of proteins are indicated in Roman numbers (I-VIII) and bold. Subclasses in the category VII are italicized
The relative abundance of each protein was assessed using label-free spectral counts, shown as mean of three (two for italicized entries) biological replicates ± SD. Single entries without SD indicate proteins that were detected in 1of 3 biological replicates from a given treatment
Bold p-values denote significant increase, while bold and underlined p-values denote significant decrease. G-test (likelihood ratio test for independence)
statistically significant at p ≤ 0.05 as compared to normoglycemic astrocytes (condition A)
Glc D-glucose; Lac L-lactate; ND not detected; NA not applicable
Currently only the temporary gene symbol assigned to the locus (LOC) is available for the trypsin pro-peptide (A0A4X1V2S2_PIG, Peptidase S1 domain-containing protein); obtained by BLAST search (https://blast.ncbi.nlm.nih.gov/Blast.cgi)
Indicates proteins listed in more than one pathway