Table 4. Performance of All Models under Consideration Are Summarizeda.
auROC |
auPR | validation accuracy | |||
---|---|---|---|---|---|
I | II | III | |||
seq based | 0.86 (0.003) | 0.90 (0.006) | 0.85 (0.006) | 0.83 (0.007) | 0.74 (0.008) |
CTD | 0.87 (0.005) | 0.90 (0.004) | 0.86 (0.003) | 0.83 (0.003) | 0.75 (0.005) |
dNNDRa | 0.87 (0.007) | 0.91 (0.005) | 0.86 (0.004) | 0.84 (0.005) | 0.76 (0.005) |
dNNDRb | 0.88 (0.005) | 0.93 (0.005) | 0.87 (0.007) | 0.86 (0.007) | 0.77 (0.008) |
dNNDRc | 0.90 (0.002) | 0.94 (0.001) | 0.89 (0.002) | 0.88 (0.003) | 0.79 (0.004) |
All the models were fivefold cross-validated with the standard deviation mentioned alongside every result. The best-performing models among the cross-validated ones are marked in bold. Note: dNNDRa: att-biLSTM, dNNDRb: att-biLSTM + descriptors, dNNDRc: biLSTM + gCNN.