TABLE 3.
Interaction of Pol IV with SSBa
| Interactionb | Expt | KD (nM) | Avg KD, nM (range) |
|
|---|---|---|---|---|
| KD 1 | KD 2 | |||
| Pol IV-SSBHis | 1 | KD1 = 0.33 | 0.47 (0.27) | 11.6 (1.40) |
| KD2 = 10.9 | ||||
| 2 | KD1 = 0.60 | |||
| KD2 = 12.3 | ||||
| Pol IV-T120P–SSBHis | 1 | KD1 = 42.5 | 37.7 (9.6) | 70.3 (7.4) |
| KD2 = 74.0 | ||||
| 2 | KD1 = 32.9 | |||
| KD2 = 66.6 | ||||
| Pol IVCD-SSBHis | 1 | KD1 = 28.1 | 28.5 (0.70) | 340 (52.0) |
| KD2 = 314 | ||||
| 2 | KD1 = 28.8 | |||
| KD2 = 366 | ||||
| Pol IVCD-T120P–SSBHis | 1 | KD1 = 2,190 | 1,845 (690) | 3,095 (490) |
| KD2 = 3,340 | ||||
| 2 | KD1 = 1,500 | |||
| KD2 = 2,850 | ||||
| Pol IVLF-SSBHis | 1, 2 | NDc | ND | ND |
See Table S3 in the supplemental material for the ka (on-rate), kd (off-rate), χ2 (likelihood of no relationship), and R2 (goodness of fit) values for these interactions.
The indicated His-tagged protein (ligand) was captured on a HIS1K biosensor, and interactions were measured using BLI.
ND, no interaction was detected.