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. 2022 Mar 21;204(4):e00477-21. doi: 10.1128/jb.00477-21

TABLE 2.

Summary of screening sizes and hit rates of TB-WCSs

Process Targeta Organism No. of compounds screened Concn Hit rate (%) Agarb Reference(s)
QS LasR P. aeruginosa 200,000 33 μM 0.01 N 30
MvfR P. aeruginosa 284,256 50 μg/mL 0.19 N 31
Pantothenate biosynthesis PanC M. tuberculosis 13,549 0.27 N 32
Proteome housekeeping ClpP1P2 M. tuberculosis 503,879 10 μM 0.04 N 19
Purine biosynthesis GuaB2 M. tuberculosis 10,000 1 and 10 μM 2.56c N 33
Secretion Tat E. coli 389,481 5–20 μM 0.016–0.6 N 39
T3SS Y. pestis 70,966 ∼17 μg/mL 0.6 N 37
P. aeruginosa 80,000 50 μM 0.4 N 36
S. enterica 92,000 ∼160 μg/mL 0.097 N 38
T2SS P. aeruginosa 75,000 50 μM 0.15 N 40
P. aeruginosa 83,986 0.17 N 41
A. baumannii 6,400 10 μM 3c N 43
P. aeruginosa 40,000 10–20 μM 0.15 N 42
PG biogenesis SAV1754 S. aureus 8 μM N 44
MreB E. coli 690,000 25 μM 0.006–0.01 N 46
WTA synthesis TarG S. aureus 55,000 38 μM 0.08 N 20
TarG S. aureus 20,000 3 and 16 μM 0.02 N 48
UppS S. aureus 1,600 20 μM 4.25c N 50
DltB S. aureus 258,000 15 μM 0.08 N 16
Oxidative protein folding DsbB E. coli, P. aeruginosa 342,109 16–33 μM 0.015 Y 51, 52
VKOR M. tuberculosis 342,109 16–33 μM 0.06–0.27 Y 51, 52
LPS biogenesis MsbA A. baumannii 150,000 5 μM 0.007 N 54
a

For pathway-directed screens, a target (underlined) of the most promising inhibitor in the screen was selected. However, these screens could detect inhibitors in other steps of the pathway or its regulation.

b

Agar-based versus liquid-based screens. Y, yes; N, no.

c

Higher hit rates are likely due to the use of preselected libraries known to target M. tuberculosis (first case) or the size of the libraries tested (second and third cases).