TATA box |
STATAWAWR (Ohler et al., 2002) |
−110 to +1 |
Initiator +G (InrG) |
TCAGTY (Ohler et al., 2002; Hendrix et al., 2008) |
−5 to −1 |
Initiator -G (Inr) |
TCAHTY (Ohler et al., 2002; Hendrix et al., 2008; Shao et al., 2019) |
−5 to −1 |
TCT motif |
YYCTTTYY (Parry et al., 2010) |
−5 to −1 |
Downstream promoter element (DPE) |
KCGGTTSK (Ohler et al., 2002) |
+1 to +50 |
Motif ten element (MTE) |
CSARCSSA (Lim et al., 2004) |
+1 to +50 |
Pause Button (PB) |
KCGRWCG (Hendrix et al., 2008) |
+1 to +50 |
Human Motif |
Consensus sequence |
TSS Search window |
|
TATA box |
TATAWAAR (Carninci et al., 2006; Ponjavic et al., 2006; Juven-Gershon et al., 2008) |
−110 to +1 |
Initiator |
YYANWYY (Javahery et al., 1994) |
−5 to −1 |
TCT motif |
YCTYTYY (Parry et al., 2010) |
−5 to −1 |
Downstream promoter element (DPE) |
RGWYV (Burke and Kadonaga, 1996) |
+1 to +50 |
Motif ten element (MTE) |
CSARCSSA (Lim et al., 2004) |
+1 to +50 |