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Performance of MDockPeP2 on the peptiDB dataset (A) and the LEADS-PEP dataset (B). peptiDB contains both bound docking cases and unbound docking cases. LEADS-PEP contains only bound docking cases. Subpanels show ranking results using different thresholds of cL-RMSD (2.0 Å, 4.0 Å, and 6.0 Å). Numbers (%) reported in the figures are ranking success rates when top 10, 100, 1000 models were considered for each case.
