Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2022 Apr 7;13:861639. doi: 10.3389/fpls.2022.861639

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2022 Gao, Selee, Schnabel, Poehlman, Chavan, Frugoli and Feltus.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

PMC Copyright notice

Functional enrichment of GeneShift output. (A) Expression profiles of several enriched GeneShift trajectory sets corresponding to Figure 3. Control uninoculated is blue, and inoculated with rhizobia is green. The unit of the y-axis is log2 (FPKM+1), and the unit of the x-axis is time (h) after rhizobia inoculation. Each thin line represents one replicate. The asterisk next to the trajectory set name indicates the pattern shifting between two conditions. (B) Gene Ontology, KEGG, fragments per kilobase of gene per million read pairs (FPKM) enrichment analysis of genes assigned to each trajectory set with Benjamini and Hochberg corrected p < 0.001. Each column of the heatmap indicates one trajectory set; each row presents one enriched term.