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. Author manuscript; available in PMC: 2023 Apr 14.
Published in final edited form as: Cell. 2022 Mar 23;185(8):1414–1430.e19. doi: 10.1016/j.cell.2022.02.025

KEY RESOURCE TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Anti-human CD3e BioLegend Cat#317326; clone OKT3
Anti-human CD28 BioLegend Cat#302943; clone CD28.2
Alexa Fluor 647 Mouse Anti-Stat5 (pY694) BD Biosciences Cat#612599; 47/Stat5(pY694)
Mouse Anti-Stat5 (pY694), PE BD Biosciences Cat#612567; 47/Stat5(pY694)
Mouse Anti-Stat3 (pY705), Alexa Fluor 647 BD Biosciences Cat#557815; clone 4/P-STAT3
Phospho-Stat1 (Tyr701) Rabbit mAb, Alexa Fluor 647 Conjugate Cell Signaling Technology Cat#8009S; clone 58D6
Phospho-Stat1 (Tyr701) Rabbit mAb, Alexa Fluor 488 Conjugate Cell Signaling Technology Cat#9174S; clone 58D6
Phospho-S6 Ribosomal Protein (Ser240/244) XP Rabbit mAb, Alexa Fluor 488 Conjugate Cell Signaling Technology Cat#5018S; clone D68F8
HA-Tag Mouse mAb, Alexa Fluor 647 Conjugate Cell Signaling Technology Cat#3444S; clone 6E2
Ultra-LEAF Purified anti-human CD337 (NKp30) Antibody BioLegend Cat#325224; clone P30–15
Anti-human CD107a (LAMP-1) Antibody, FITC Biolegend Cat#328606; clone H4A3
BD GolgiPlug Protein Transport Inhibitor (containing Brefeldin A) BD Biosciences Cat#555029
GolgiStop Protein Transport Inhibitor (Containing Monensin) BD Biosciences Cat#554724
Fixation/Permeabilization Solution Kit BD Biosciences Cat#554714
PE-Cy7 Mouse Anti-Human TNF BD Biosciences Cat#557647; clone Mab11
Perm buffer III BD Biosciences Cat#558050
Mouse Anti-Human CD8, PE BD Biosciences Cat#555635; clone HIT8a
Mouse Anti-Human MIP-1β, PE BD Biosciences Cat#550078; clone D21–1351
Mouse Anti-Human IFN-γ, Alexa Fluor 647 BD Biosciences Cat#557729; clone B27
Anti-human CD122 (IL-2Rβ) Antibody, APC Biolegend Cat#339008; clone TU27
Anti-human CD3 Antibody, APC Biolegend Cat#300439; clone UCHT1
Anti-human CD45RA Antibody, APC Biolegend Cat#304150; clone HI100
Anti-human IFN-γ Antibody, APC Biolegend Cat#506510; clone B27
Anti-human CD8 Antibody, APC/Cyanine7 Biolegend Cat#344714; clone SK1
Anti-human CD56 (NCAM) Antibody, Brilliant Violet 605 Biolegend Cat#362538; clone 5.1H11
Anti-human CD197 (CCR7) Antibody, Brilliant Violet 605 Biolegend Cat#353224; clone G043H7
Anti-human CD8a Antibody, Brilliant Violet 605 Biolegend Cat#344742; clone SK1
Anti-human CD4 Antibody, Brilliant Violet 785 Biolegend Cat#300554; clone RPA-T4
Anti-human CD3 Antibody, FITC Biolegend Cat#300452; clone UCHT1
Anti-human CD4 Antibody, FITC Biolegend Cat#300538; clone RPA-T4
FITC anti-human CD69 Antibody Biolegend Cat#310904; Clone FN50
Anti-human CD3 Antibody , Pacific Blue Biolegend Cat#300431; clone UCHT1
Anti-human CD4 Antibody, Pacific Blue Biolegend Cat#300521; clone RPA-T4
Anti-human IL-2 Antibody, Pacific Blue Biolegend Cat#500307; clone MQ117H12
Phospho-p44/42 MAPK (Erk1/2) (Thr202/Tyr204) Rabbit mAb, Alexa Fluor 647 Conjugate Biolegend Cat#13148s; clone 197G2
Phospho-Akt (Ser473) XP Rabbit mAb, Alexa Fluor 647 Conjugate Cell Signaling Technology Cat#4075S; clone DE9
Bacterial and Virus Strains
Mix & Go Competent Cells - DH5α Zymo Research Cat#T3007
Biological Samples
Human peripheral mononuclear cells (PBMCs), isolated from leukocyte reduction shuttles Stanford Blood Center N/A
Chemicals, Peptides, and Recombinant Proteins
SA sensor chip Cytiva Cat#BR-1005–31
HBS-P Cytiva Cat#BR-1006–71
EasySep Magnet StemCell Technologies Cat#18000
Human CD8+ T cell Isolation Kit Miltenyi Cat#130–096-495
LS magnetic selection column Miltenyi Cat#130–042-401
EasySep Human Naïve Pan T Cell Isolation Kit StemCell Technologies Cat#17961
ExpiFectamine 293 Transfection Kit Gibco Cat#A14525
Sapphire Baculovirus DNA Allele Cat#ABP-BVD-10002
RNeasy Plus Mini Kit Qiagen Cat#74134
CellTrace Violet Proliferation Kit Invitrogen Cat#C34557
Bio-Safe Coomassie G-250 Stain, 5L Biorad Cat#1610787
UltraComp eBeads eBiosciences Cat#01–2222-42
16% Paraformaldehyde aqueous solution Electron Microscopy Sciences Cat#15710
EndoH Produced in house N/A
Kifunensine Toronto Research Chemicals Cat#K450000
BirA Produced in house (Fairhead and Howarth, 2015) N/A
Streptavidin Sigma Cat#189730
Alexa Flour 647 C2 Maleimide Invitrogen Cat#A20347
Human MSA-IL-2 Produced in house (Glassman et al., 2021) Produced in house
Human IFNω Produced in house (Thomas et al., 2011) Produced in house
Human IL-15 R&D systems Cat#247-ILB-025
Human IL-7 R&D systems Cat#207-IL-010
PE-AnnexinV Biolegend Cat#640947
Ionomycin Sigma Cat#I9657–1MG
Phorbol 12-myristate 13-acetate (PMA) Sigma Cat#P8139–5MG
Cellfectin II Gibco Cat#10362100
Carboxypeptidase A Sigma Cat#C9268
Carboxypeptidase B Sigma Cat#217356
Expi293 Expression Medium Gibco Cat#A1435101
Sf-900 III Media Invitrogen Cat#12658019
ESF 921 Insect Cell Culture Medium Expression Systems Cat#96–001-01
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MY193-R This paper N/A
MY194-F This paper N/A
MY194-R This paper N/A
MY195-F This paper N/A
MY195-R This paper N/A
IL2Rβ-Nb6 This paper N/A
γc-Nb6 This paper N/A
Human IL2Rβ ECD This paper N/A
Human γc ECD This paper N/A
HIS1 This paper N/A
HIS2 This paper N/A
HIS3 This paper N/A
HIS4 This paper N/A
HIS5 This paper N/A
HIS6 This paper N/A
HIS7 This paper N/A
A1 VHH monomer This paper N/A
10Rβ1–2Rβ6 (8a.a. linker) This paper N/A
10Rβ3–2Rβ6 (8a.a. linker) This paper N/A
10Rβ4–2Rβ1 (8a.a. linker) This paper N/A
2Rβ3–10Rβ1 (8a.a. linker) This paper N/A
10Rβ1–2Rβ6 (0a.a. linker) This paper N/A
10Rβ1–2Rβ6 (4a.a. linker) This paper N/A
10Rβ1–2Rβ6 (12a.a. linker) This paper N/A
10Rβ1–2Rβ6 (16a.a. linker) This paper N/A
10Rβ1–2Rβ6-Fc This paper N/A
Critical Commercial Assays
Superdex 200 Increase column 10/300 GL Cytiva Cat#28990944
Superdex 75 Increase column 10/300 GL Cytiva Cat#29148721
SA sensor chip Cytiva Cat#BR-1005–31
HBS-P Cytiva Cat#BR-1006–71
Yeast-Display Nanobody Library (NbLib) Kerafast Cat#EF0014-FP
Deposited Data
γc:γc-Nb6 Complex Crystal Structure RSCB 7S2R
RNA-seq dataset GEO GSE183436
IL2Rβ:β-Nb6 Complex Crystal Structure RSCB 7S2S
Experimental Models: Cell Lines
Human: Expi293F GIBCO Cat#A14527
Insect: Spodoptera frugiperda (Sf9) ATCC Cat#CRL-1711
Insect: Trichoplusia ni (T. ni) Expression Systems Cat#94–002F
Human: YT-1 (CD25+) N/A
Human: K-562 ATCC Cat#CCL-243
Human: A-375 ATCC Cat#CRL-1619
Recombinant DNA
DNA
pD649 MY140-F This paper N/A
pD649 MY140-R This paper N/A
pD649 MY141-F This paper N/A
pD649 MY141-R This paper N/A
pD649 MY177-F This paper N/A
pD649 MY177-R This paper N/A
pD649 MY171-F This paper N/A
pD649 MY171-R This paper N/A
pD649 MY144-F This paper N/A
pD649 MY144-R This paper N/A
pD649 MY145-F This paper N/A
pD649 MY145-R This paper N/A
pD649 MY178-F This paper N/A
pD649 MY178-R This paper N/A
pD649 MY172-F This paper N/A
pD649 MY172-R This paper N/A
pD649 MY142-F This paper N/A
pD649 MY142-R This paper N/A
pD649 MY143-F This paper N/A
pD649 MY143-R This paper N/A
pD649 MY179-F This paper N/A
pD649 MY179-R This paper N/A
pD649 MY173-F This paper N/A
pD649 MY173-R This paper N/A
pD649 MY188-F This paper N/A
pD649 MY188-R This paper N/A
pD649 MY189-F This paper N/A
pD649 MY189-R This paper N/A
pD649 MY190-F This paper N/A
pD649 MY190-R This paper N/A
pD649 MY191-F This paper N/A
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pD649 MY192-F This paper N/A
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pD649 MY193-F This paper N/A
pD649 MY193-R This paper N/A
pD649 MY194-F This paper N/A
pD649 MY194-R This paper N/A
pD649 MY195-F This paper N/A
pD649 MY195-R This paper N/A
pD649 IL2Rβ-Nb6 This paper N/A
pD649 γc-Nb6 This paper N/A
pD649 ATUM Cat#PD649
Software and Algorithms
FlowJo v10.5 Tree Star RRID: SCR_008520
GraphPad Prism 9.1.0 GraphPad Software RRID: SCR_002798
BIAevaluation software Cytiva RRID: SCR_015936
PHENIX (Liebschner et al., 2019) RRID:SCR_014224
Coot (Emsley et al., 2010) RRID:SCR_014222
SBGrid (Morin et al., 2013) RRID:SCR_003511
DESEQ2 (Love et al., 2014) RRID:SCR_015687
STAR https://github.com/alexdobin/STAR/releases RRID:SCR_004463
UCSF ChimeraX https://www.cgl.ucsf.edu/chimerax/ RRID:SCR_015872