Table 4.
Average Spearman correlation coefficients as mentioned in the study that introduced each method
| Models | Same cell line | New cell line |
|---|---|---|
| DeepCRISPR | 0.601 | 0.406 (LOCO) |
| DeepCas9 | - | 0.351 |
| DeepSpCas9 | - | 0.464 |
| DeepHF | 0.867 | 0.433 |
| CRISPRLearner | 0.432 | - |
| CNN-SVR* | 0.714 | 0.714 (LOCO) |
| C-RNNCrispr* | 0.699 | 0.692 (LOCO) |
| Azimuth 2.0 | 0.514 | 0.462 |
‘Same cell line’: includes data from the cell line that was used to train the specific model.
‘New cell line’: includes data from new cell line(s).
‘LOCO’: Leave-One-Cell-Out procedure.
*: model has been pre-trained on data including all cell lines.
There are no available data for E-CRISP, which is omitted.