Abbreviation	Meaning
1D	One-dimensional
3C	Chromosome conformation capture
3D	Three-dimensional
ABC	Activity-by-contact
AD	Alzheimer’s disease
ADHD	Attention deficit hyperactivity disorder
BD	Bipolar disorder
CNV	Copy number variants
CT	Chromosome territory
DEL	Deletions
DG	Dentate gyrus
DUP	Duplication
FIRE	Frequently interacting region
GWAS	Genome-wide association studies
Hi-C	High-throughput chromatin conformation capture
INV	Inversion
LDSC	Linkage disequilibrium score regression
Mb	Mega-base
MEI	Mobile element insertion
MP	Mental process
PIR	Promoter interacting regions
TAD	Topologically associating domain
sci-Hi-C	Single-cell combinatorial index Hi-C
SCZ	Schizophrenia
scHi-C	Single cell Hi-C
SNP	Single nucleotide polymorphism
SV	Structural variant
UD	Unipolar depression
WES	Whole exome sequencing
WGS	Whole genome sequencing