Fig. 2.

F1 scores of SV genotyping methods based on the simulated data. The x-axis is the SV type, and the y-axis shows the F1 score of each SV genotyping method. Performance was estimated on ~ 30× PacBio CLR data. The alignment files were generated by minimap2 because its output was compatible to all SV genotyping methods. SVJedi and VaPoR are inapplicable to DUPs and TRAs, respectively. INS: insertion, DEL: deletion, DUP: duplication, INV: inversion, TRA: translocation