TABLE 2.
Interaction analysis in exome, targeted and HLA sequencing data
| Vatiant 1 | Vatiant 2 | OR | p | Gene 1 | Gene 2 |
|---|---|---|---|---|---|
| HLA‐C*06:02 | rs118179173 | 0.22 | 8.21E‐20 | HLA‐C | HLA‐B |
| HLA‐C*06:02 | HLA‐B:AA67 | 0.45 | 1.22E‐12 | HLA‐C | HLA‐B |
| chr5_96139250 | HLA‐C*06:02 | 0.74 | 3.61E‐07 | ERAP1 | HLA‐C |
| chr5_96117300 | HLA‐C*06:02 | 0.75 | 1.68E‐06 | ERAP1 | HLA‐C |
| HLA‐C*06:02 | HLA‐C*07:04 | 0.28 | 6.86E‐06 | HLA‐C | HLA‐C |
| chr5_96118852 | HLA‐C*06:02 | 0.78 | 3.43E‐05 | ERAP1 | HLA‐C |
| chr5_96125910 | HLA‐C*06:02 | 0.78 | 3.81E‐05 | ERAP1 | HLA‐C |
| snp31443520 | HLA‐DPB1*05:01 | 1.47 | 6.07E‐05 | HLA‐B | HLA‐DPB1 |
| chr5_96124447 | HLA‐C*06:02 | 0.79 | 6.44E‐05 | ERAP1 | HLA‐C |
| chr5_96121994 | HLA‐C*06:02 | 0.79 | 6.50E‐05 | ERAP1 | HLA‐C |
| chr5_96121715 | HLA‐C*06:02 | 0.79 | 6.96E‐05 | ERAP1 | HLA‐C |
| chr5_96129512 | HLA‐C*06:02 | 0.80 | 0.0002089 | ERAP1 | HLA‐C |
| chr5_96222183 | HLA‐C*06:02 | 0.80 | 0.0002627 | ERAP2 | HLA‐C |
| HLA‐C*06:02 | HLA‐DPB1*05:01 | 1.26 | 0.0002793 | HLA‐C | HLA‐DPB1 |
| chr5_96222185 | HLA‐C*06:02 | 0.81 | 0.0005506 | ERAP2 | HLA‐C |
| chr5_96232222 | HLA‐C*06:02 | 0.82 | 0.0009334 | ERAP2 | HLA‐C |
| chr5_96237114 | HLA‐C*06:02 | 0.82 | 0.0009459 | ERAP2 | HLA‐C |
| chr5_96132795 | HLA‐C*06:02 | 0.77 | 0.0009922 | ERAP1 | HLA‐C |