Antibodies
|
Chicken polyclonal anti-NeuN |
Millipore Sigma |
Cat#:ABN191, RRID:AB_11205760 |
Chicken polyclonal anti-GFP |
ThermoFisher Scientific |
Cat#:A10262, RRID:AB_2534023 |
Guinea pig polyclonal anti-NeuN |
Millipore Sigma |
Cat#:ABN90, RRID:AB_11205592 |
Mouse monoclonal anti-HA |
BioLegend |
Cat#:901513, Clone ID: 16B12, RRID:AB_2565335 |
Mouse monoclonal anti-NeuN |
Millipore Sigma |
Cat#:MAB377, RRID:AB_2298772 |
Rabbit polyclonal anti-Arc |
Synaptic Systems |
Cat#:156003, RRID:AB_887694 |
Bacterial and Virus Strains
|
rAAV-CaMKIIα-eArchT3.0-eYFP |
UNC Vector Core |
Cat#:AV4883 |
rAAV-CaMKIIα-eYFP |
UNC Vector Core |
Cat#:AV4808c |
pAAV-CaMKIIα-hM4D(Gi)-mCherry |
Bryan Roth (unpublished) |
Cat#:50477, RRID:Addgene_50477 |
pAAV-CaMKIIα-mCherry |
UNC Vector Core |
Cat#:AV4809D |
pAAV-PRAM-d2tTA:TRE-NLS-mKate2-WPREpA |
Sorensen et al., Elife, 2016
|
Cat#:84474, RRID:Addgene_84474 |
pAAV-PRAM-d2tTA:TRE-HA-hM4D(Gi)-WPREpA |
This paper |
N/A |
pENN.AAV.CamKII.GCaMP6f.WPRE.SV40 |
Penn Vector Core |
Cat#100834, RRID:Addgene_100834 |
pAAV-hSyn-hM4D(Gi)-mCherry |
Bryan Roth (unpublished) |
Cat#:50475, RRID:Addgene_50475 |
pAAV-hSyn-mCherry |
Karl Deisseroth (unpublished) |
Cat#:114472, RRID:Addgene_114472 |
Chemicals, Peptides, and Recombinant Proteins
|
Cholrea Toxin Subunit B, Alex Fluor 555 |
ThermoFisher Scientific |
C22843 |
Clozapine N-Oxide |
Enzo Life Sciences |
BML-NS105-0025, CAS: 34233-69-7 |
Clozapine N-Oxide-dihydrochloride |
HelloBio |
HB6149, CAS: 2250025-93-3 |
DAPI (4’,6-Diamidino-2-Phenylindole, Dihydrochloride) |
ThermoFisher Scientific |
D1306, CAS: 28718-90-3 |
Dil |
Biotium |
Cat#60010, CAS: 41085-99-8 |
NMDA (N-Methyl-D-aspartic acid) |
Sigma |
M3262, CAS:6384-92-5 |
(RS)-CPP |
Tocris |
Cat#0173, CAS: 100828-16-8 |
VECTASHIELD® Antifade Mounting Medium |
Vector Laboratories |
H-1000, RRID:AB_2336789 |
Critical Commercial Assays
|
In-Fusion HD Cloning Plus kit |
Takara |
638920 |
Experimental Models: Organisms/Strains
|
C57BL/6J |
Jackson Labs |
Cat#:000664, RRID:IMSR_JAX:000664 |
Software and Algorithms
|
Behavioral Observation Research Interactive Software (BORIS) |
Friard & Gamba, Methods in Ecology and Evolution, 2016
|
http://www.boris.unito.it/, RRID:SCR_021434 |
Clampex 11.2 |
Molecular Devices |
https://www.moleculardevices.com/products/axon-patch-clamp-system/acquisition-and-analysis-software/pclamp-software-suite, RRID:SCR_011323 |
Clampfit 11.2 |
Molecular Devices |
https://www.moleculardevices.com/products/axon-patch-clamp-system/acquisition-and-analysis-software/pclamp-software-suite, RRID:SCR_011323 |
Custom MATLAB Code |
This paper |
https://zenodo.org/record/5838961, DOI: 10.5281/zenodo.5838961
|
ImageJ |
NIH |
https://imagej.nih.gov/ij/, RRID:SCR_003070 |
Inscopix Data Processing Software 1.2.1 |
Inscopix |
N/A |
MATLAB |
MathWorks |
https://www.mathworks.com/products/matlab.html?s_tid=hp_products_matlab, RRID:SCR_001622 |
Mosaic 1.2.0 |
Inscopix |
RRID:SCR_017408 |
Prism 9 |
GraphPad |
https://www.graphpad.com/scientific-software/prism/, RRID:SCR_002798 |
Video Freeze |
Med Associates |
https://www.med-associates.com/product/video-fear-conditioning/, SOF-843, RRID:SCR_014574 |
Zen Blue 2.3 |
Zeiss |
https://www.zeiss.com/microscopy/int/products/microscope-software/zen.html,RRID:SCR_021725 |
Zen Lite |
Zeiss |
https://www.zeiss.com/microscopy/int/products/microscope-software/zen.html, RRID:SCR_021725 |
Other
|
10 μL Microliter Syringe Model 701 |
Hamilton |
80301 |
3-D Printed Custom-Designed Microdrive |
This paper |
N/A |
532 nm Laser |
Ultralasers |
CST-w532–500mW |
Axon Digidata 1550B |
Molecular Devices |
N/A |
Baseplate |
Inscopix |
1050–004638 |
C&B Metabond Quick Adhesive Cement System |
Parkell |
S380 |
Capillary Borosilicate Glass 1.5mm OD, 0.84mm ID, 6 inch length, with filament |
World Precision Instruments |
1B150F-4 |
Dense Fabric Ball Attached to String |
This paper |
N/A |
Digital Lynx 4SX |
NeuraLynx |
N/A |
Doxyclyine mouse food 40 mg/kg, custom |
Bio-serv |
F5003 |
Elevated Platform for Unrelated Aversive Experience (Bright Light Illumination) |
This paper |
N/A |
Function Generator |
Siglent |
SDG810 |
Inline Heater |
Warner Instruments |
SH-27B |
Lecia VT1000 S Vibrating Blade Microtome |
Leica |
VT1000 S |
Leica S6E Stereomicroscope |
Leica |
S6E |
Microelectrode Holder (MPH6S) |
World Precision Instruments |
MPH6S10 |
MicroFil |
World Precision Instruments |
MF28G-5 |
Microinjection Syringe Pump |
World Precision Instruments |
UMP3T-1 |
Mono Fiber Optic Cannula |
Doric Lenses |
MFC_200/240-0.22_50mm_ZF1.25(G)_FLT |
MultiClamp 700B Microelectrode Amplifier |
Molecular Devices |
N/A |
NIR Video Fear Conditioning Package for Mouse |
Med Associates |
MED-VFC-OPTO-USB-M |
NOA81 – Fast Curing Optical Adhesive |
Norland |
NOA81 |
nVoke v1.0 |
Inscopix |
N/A |
Observational Fear Apparatus |
This paper |
N/A |
Pipette Puller |
Narishige |
PC-100 |
ProView Lens Probe |
Inscopix |
1050-004608 |
ProView Prism Probe |
Inscopix |
1050-004612 |
Single Channel Temperature Controller |
Warner Instruments |
TC-324C |
Small Animal Stereotaxic Instrument with Digital Display Console |
David Kopf Instruments |
Model 942 |
UV Curing LED System, 365 nm |
ThorLabs |
CS2010 |
Wiretrol® I |
Drummond Scientific Company |
5-000-1001-X |
Zeiss Axio Examiner A1 |
Zeiss |
N/A |
Zeiss AxioImager M2 with Apotome |
Zeiss |
N/A |
Zeiss LSM800 with Airyscan |
Zeiss |
N/A |