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. Author manuscript; available in PMC: 2023 Apr 1.
Published in final edited form as: J Proteome Res. 2022 Mar 2;21(4):1124–1136. doi: 10.1021/acs.jproteome.1c00960

Figure 6. Evaluation of quantitative performance.

Figure 6.

(A) CVs for trypsin and mixture analyses of HSC-6 and SCC-25 cell lines using either re-CID or bt-CID. (B) Overlap of significantly changing proteins (corrected P-value <0.05) for trypsin and mixture analyses using either re-CID or bt-CID. (C) Correlation of log2 fold-change values (SCC-25 vs. HSC-6) for common proteins in the trypsin-only (x-axis) and mixture (y-axis) datasets analyzed with re-CID. (D) Correlation of log2 fold-change values (SCC-25 vs. HSC-6) for common proteins in the trypsin-only (x-axis) and mixture (y-axis) datasets analyzed with bt-CID.