Skip to main content
. 2022 Apr 4;25(5):104198. doi: 10.1016/j.isci.2022.104198
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Mouse monoclonal anti-MBNL1 Wolfson Centre for Inherited Neuromuscular Disease MB1a; RRID:AB_2618248
Rabbit monoclonal anti-GAPDH Abcam Cat# ab181602; RRID:AB_2630358
Rabbit polyclonal anti-RBFOX2 Sigma Aldrich Cat# HPA006240; RRID:AB_1079750

Deposited data

Raw and analyzed data This paper SRA: PRJNA795461

Experimental models: Cell lines

Human: Non-disease fibroblasts Laboratory of Laura Ranum CNTRL-A
Human: Non-disease fibroblasts Laboratory of Laura Ranum CNTRL-B
Human: DM1 fibroblasts Laboratory of Laura Ranum DM1-A
Human: DM1 fibroblasts Laboratory of Laura Ranum DM1-B
Human: DM2 fibroblasts Laboratory of Laura Ranum DM2-A
Human: DM2 fibroblasts Laboratory of Laura Ranum DM2-B
Human: DM2 fibroblasts Laboratory of Laura Ranum DM2-C
Human: DM2 fibroblasts Laboratory of Laura Ranum DM2-D

Oligonucleotides

DsiRNA targeting sequence: MBNL1 IDT hs.Ri.MBNL1.13.1
Negative Scramble DsiRNA control IDT Cat# 51-01-19-09
FISH CTG repeat probe: Cy3-CAGCAGCAGCAGCAGCAGCAGCAG IDT N/A
FISH CCTG repeat probe: Cy3-CAGGCAGGCAGGCAGGCAGGCAGG IDT N/A
All qPCR primer sequences listed in Table 1 in Method details IDT N/A
All splicing primers sequences listed in Table 2 in Method details IDT N/A

Software and algorithms

Prism 7 GraphPad https://www.graphpad.com/scientific-software/prism/
STAR https://doi.org/10.1093/bioinformatics/bts635 version 2.5.1b
rMATS https://doi.org/10.1073/pnas.1419161111 version 3.2.5
GeneOntology Tools https://doi.org/10.1038/75556 and https://doi.org/10.1093/nar/gkaa1113 Various