TABLE 2.
Clean reads generated by Nanopore sequencing.
| SampleID | ReadNum | BaseNum | N50 | MeanLength | MaxLength | MeanQscore |
|---|---|---|---|---|---|---|
| H02 | 6,752,439 | 6,175,485,611 | 962 | 914 | 66,795 | Q9 |
| H10 | 5,532,529 | 5,609,156,050 | 1,205 | 1,013 | 74,639 | Q9 |
| H12 | 6,119,569 | 6,807,516,576 | 1,326 | 1,112 | 11,721 | Q9 |
| H14 | 6,456,458 | 6,621,242,447 | 1,213 | 1,025 | 9,744 | Q9 |
| H16 | 5,959,362 | 5,718,222,829 | 1,047 | 959 | 8,348 | Q10 |
| H17 | 6,603,190 | 5,758,174,836 | 925 | 872 | 8,386 | Q10 |
| H18 | 7,894,304 | 8,235,168,413 | 1,182 | 1,043 | 12,564 | Q9 |
| H21 | 7,896,545 | 7,225,249,807 | 931 | 914 | 15,533 | Q10 |
| H22 | 6,985,943 | 7,505,345,391 | 1,252 | 1,074 | 15,392 | Q9 |
| H24 | 7,600,605 | 7,845,590,054 | 1,129 | 1,032 | 12,159 | Q9 |
| H25 | 8,496,048 | 7,837,286,862 | 954 | 922 | 84,628 | Q9 |
| H26 | 7,469,849 | 6,585,331,944 | 904 | 881 | 11,670 | Q10 |
| H27 | 5,894,109 | 5,703,324,956 | 1,033 | 967 | 23,311 | Q10 |
| H28 | 6,376,313 | 5,618,395,573 | 908 | 881 | 25,245 | Q10 |
| H29 | 5,932,342 | 5,519,352,014 | 949 | 930 | 13,970 | Q10 |
| L04 | 5,562,596 | 5,800,700,649 | 1,215 | 1,042 | 13,845 | Q9 |
| L06 | 11,541,467 | 8,660,383,334 | 758 | 750 | 11,037 | Q10 |
| L09 | 6,491,467 | 6,103,125,627 | 1,002 | 940 | 10,014 | Q9 |
| L14 | 9,213,725 | 11,281,078,708 | 1,426 | 1,224 | 15,650 | Q8 |
| L16 | 7,081,487 | 7,384,134,414 | 1,227 | 1,042 | 13,875 | Q9 |
| L19 | 5,469,901 | 6,385,532,830 | 1,378 | 1,167 | 11,430 | Q9 |
| L21 | 10,590,964 | 7,946,674,581 | 754 | 750 | 10,489 | Q9 |
| L22 | 5,890,517 | 6,526,928,880 | 1,337 | 1,108 | 11,814 | Q9 |
| L23 | 13,079,729 | 9,621,611,190 | 744 | 735 | 10,721 | Q9 |
| L24 | 5,891,637 | 5,881,567,295 | 1,168 | 998 | 10,849 | Q9 |
| L25 | 9,107,417 | 7,198,198,707 | 781 | 790 | 208,750 | Q9 |
| L26 | 6,708,535 | 5,924,625,514 | 933 | 883 | 9,126 | Q9 |
| L27 | 6,594,848 | 6,138,091,481 | 984 | 930 | 10,142 | Q10 |
| L28 | 7,043,122 | 7,191,261,618 | 1,125 | 1,021 | 21,550 | Q9 |
| L31 | 6,470,694 | 5,937,781,634 | 936 | 917 | 35,868 | Q10 |
ReadNum, number of sequences; BaseNum, the total number of bases; N50, N50 length; MeanLength, average length of reads; MaxLength, longest reads length; MeanQscore, mean quality score.