Table 3.
List of primers used in this study
| Gene | Sequence (5’-3’) | Reference |
|---|---|---|
| katG catR | F:ACTTCCCGTTGCCAGCGCCTCTTTCATTATAACCCTGTGTTTATTATGAAGTGTAGGCTGGAGCTGCTTC R:AGCATCGTTTTTGCCAATTCCCTCCCCGAATGAGGGAGGGAAGGTTGCCAATGGGAATTAGCCATGGTCC |
This study |
| katG-Flanking | F: ACTTCCCGTTGCCAGCGCCTCTTTC R: AGCATCGTTTTTGCCAATTCCCTCC |
This study |
| katG-Inner | F: GACGGTAAACCCGTCACCAG R: ACTCCCGGTACGTTCAGACT |
This study |
| clpP catR | F:TTGAGGGATGACCTCATTTAATCTCCAGTAGCAATTTTGACCTGTTATGGGTGTAGGCTGGAGCTGCTTC R:TTTTAAACAAAAACGAGCCCGTCAGGGCCCGTTTTATTCAAATTTGTGACATGGGAATTAGCCATGGTCC |
This study |
| clpP- Flanking | F: ATTACCACCACCGCATACC R: GCTTCGACTATCTCAGCTAAC |
This study |
| clpP-Inner | F: TCAATAAATCACATCCCAAGCC R: CCCTTCAGCAAAATTAAGCATC: |
This study |
| ftsH catR | F:TGACGCTGTTTTTAACACAGTTGTAATAAGAGGTTAATCCCTTGAGTGACGTGTAGGCTGGAGCTGCTTC R:AAGCCCCAGGGTTTCGGTGAGCGCTAAACATAATGTTGTAAAACAAATGCATGGGAATTAGCCATGGTCC |
This study |
| FtsH- Flanking | F: GCGAAAGTGATAACCGGCAG R: CGGATGAGTGAGATCGAGCG |
This study |
| FtsH- Inner | F: GGGTTGTGACGAAGCGAAAG R: AAGCCGTCCATCTCAACCAG |
This study |
| hsIUV catR | F:TGCATTATGCCCCGTACGCCGTACGGGGCCGCAATTCAGCATTAGTAACCGTGTAGGCTGGAGCTGCTTC R:TTCAGTTCGCTGACAATTTCGCGTGGGGTCATTTCAGACATGAGAGGTCCATGGGAATTAGCCATGGTCC |
This study |
| hsIUV-Flanking | F: AAGATGGCGGGCCATACAAA R: CATCAAGCTGCATACGACGC |
This study |
| hsIUV – Inner | F: GGCAACGTGAAGAAAGTCCG R: GCCTGCAATATCCAACGCCT |
This study |
| KatG (pET28) | F: GAATTCATGAGCACGACCGACGATAC R: AAGCTTGCTGCCGTCAAAGTTGGTTC |
This study |
| LonPD (pET28) | F: GCGAATTCGAAAACCGCGTAGGT R: GGAAGCTTGTTTTGCAGAGCAAG |
This study |
| B2H primers | ||
| katG | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCTTGCAGATCGAAACGGTC |
This study |
| Lon PD | F: CGGGATCCCGAAAACCGCGTAGGTCAG R: CGGGTACCGCGTTTTGCAGAGCAAGCGT |
This study |
| katG (1–206)* | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCGTGAGTCAACCAGGCTTT |
This study |
| katG (1–207) | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCTCGGTGAGTCAACCAGGCT |
This study |
| katG (1–208) | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCGTGTCGGTGAGTCAACCA |
This study |
| katG (1–209) | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCAGGGTGTCGGTGAGTCAAC |
This study |
| katG (1–210) | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCTTCAGGGTGTCGGTGAGTC |
This study |
| katG (1–211) | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCCGCTTCAGGGTGTCGGTGA |
This study |
| katG (1–379) | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCCGTCAGGTCGGTGACCAG |
This study |
| katG (1–380) | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCCAGCGTCAGGTCGGTGAC |
This study |
| katG (1–381) | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCACGCAGCGTCAGGTCGGT |
This study |
| katG (1–382) | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCAAAACGCAGCGTCAGGTC |
This study |
| katG (1–383) | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCATCAAAACGCAGCGTCAG |
This study |
| katG (1–384) | F: CGGGATCCCATGAGCACGACCGACGAT R: CGGGTACCGCCGGATCAAAACGCAGCGT |
This study |
| qRT-PCR | ||
| Salmonella | ||
| rrsG | F: GTTACCCGCAGAAGAAGCAC R: CACATCCGACTTGACAGACC |
This study |
| sopE | F: TTCAAGCCCCACTTCAAGCC R: TGAGTCAAATCCAGAACATGCC |
This study |
| sseJ | F: ACGGATGCGACAAAAATCAC R: ACCTTGGAAGCCCTACAGAC |
This study |
| sifA | F: AGACAATGAACGCTACACAC R: TCTTTTCTTCCACATCTATGCC |
This study |
| invC | F: GACAACATACTGCTAACCGAC R:ATCACTCTTCACCTGCTCC |
This study |
| katE | F: ATTCCGGAAGAGTTGGTGCCAGTA R: GACGACTGATTTGCGTGTCGGTAT |
51 |
| katN | F: GCGCGAGCGAAGATCATTTAT R: GCGACTTCACGGGTCATTAAGA |
51 |
| katG | F: TTAACTCCTGGCCGGATAAC R: TAATCGGCCACAACAAACG |
51 |
| TsaA/ahpC | F: TTTGTTTGCCCGACTGAACTGG R: TGTGCGTGAAGTGAGTATCGGT |
51 |
| ahpF | F: GGCTATCGATCTGGCAGGTATTGT R: TACGCACTTTGTCCTGTAGCA |
51 |
| Mouse | ||
| IL-2 | F: CCTGAGCAGGATGGAGAATTACA R: TCCAGAACATGCCGCAGAG |
52 |
| IL-6 | F: GAGGATACCACTCCCAACAGACC R: AAGTGCATCATCGTTGTTCATACA |
52 |
| TNF-α | F: CATCTTCTCAAAATTCGAGTGACAA R: TGGGAGTAGACAAGGTACAACCC |
52 |
| GAPDH | F: TCACCACCATGGAGAAGGC R: GCTAAGCAGTTGGTGGTGCA |
52 |
| Human | ||
| IL-2 | F: AACTCACCAGGATGCTCACATTTA R: TCCCTGGGTCTTAAGTGAAAGTTT |
52 |
| IL-6 | F: CATCCTCGACGGCATCTCAG R: GCTCTGTTGCCTGGTCCTC |
53 |
| TNF-α | F: TCTTCTCGAACCCCGAGTGA R: CCTCTGATGGCACCACCAG |
52 |
| GAPDH | F: GGAAGGTGAAGGTCGGAGTC R: CAGCCTTGACGGTGCCATG |
53 |
F-Forward primer; R- Reverse primer. *The numbers in parenthesis indicate corresponding amino acid residues.