Table 2.
Mutations of ABCD1 gene in the pedigrees of X-ALD.
No. | Nucleotide mutations | Amino acid variants | Exon | Variation type | Inheritance | ESP6500 | 1000G | dbSNP | PROVEAN score | Mutation taster | Pathogenicity evaluation |
---|---|---|---|---|---|---|---|---|---|---|---|
Case 1 | c.874_876delGAG | p.Glu292del | 1 | Deletion | Familial | ND | ND | ND | −13.987 (deleterious) | Disease causing | Likely pathogenic (PM2 + PM4, PP3 + PP4 + PP5) |
Case 2 | c.874_876delGAG | p.Tyr33Profs∗161 | 1 | Deletion | Familial | ND | ND | ND | −6.7 (deleterious) | Disease causing | Pathogenic (PVS1, PM2 + PM4, PP3 + PP4 + PP5) |
ND, not detected. Pathogenicity evaluation of American College of Medical Genetics (ACMG) guideline. PROVEAN score (cutoff = −2.5)