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. 2021 Mar 2;19(4):619–628. doi: 10.1016/j.gpb.2020.10.007

Table 1.

Comparison of memory and time costs between the “speed” and “memory” modes in rMVP

Mode Data unit (memory/time, Gb/min)
1 2 4 8 16
Speed 0.51/0.05 3.28/0.15 17.80/0.6 73.10/3.2 285.60/34.70
Memory 0.06/0.20 0.08/1.61 0.17/9 0.53/42.12 2.06/461.66

Note: Data for speed test are generated by PLINK software and each data unit represents 1000 samples and 100,000 SNPs. Parallel computation with 32 CPUs is used to speed up for both modes. All tests are performed on a Red Hat Enterprise Linux sever with 2.60 GHz Intel(R) Xeon(R) 32CPUs E5-4620 v2 and 512 GB memory.