TABLE 1.
M. smegmatis strain | Genome length (Mb) | No. of predicted genes | No. of predicted unique genes | GenBank accession no. |
---|---|---|---|---|
MKD8 | 7.119169 | 6,755 | 818 | CP027541.1 |
Jucho | 6.895172 | 6,558 | 34 | CP080274 |
Rabinowitchi | 7.061747 | 6,709 | 386 | CP080272 |
Nishi | 7.010278 | 6,673 | 275 | CP080273 |
mc2155 | 6.988209 | 6,681 | 140 | NC_008596 |
Gene predictions and annotations were performed using Prokka (36). The number of unique genes was provided by a pangenome analysis using Roary (42). Predicted unique genes are those genes found in only one of the five strains. Genes in common between strains and unique genes are listed in Table S1 in the supplemental material.