TABLE 2.

Selected genes related to substrate and amino acid uptake present in genomes from members of the genus Defluviicoccus.

Gene symbol	Description	Presence/absence within genome
		D. vanus	Ca. D. tetra. TF071	Ca. D. sp. SSA4	Ca. D. sp. Fred MAXAC 307	Ca. D. sp. Fred MAXAC 378	Ca. D. sp. GAO-HK	Ca. D. seviourii	Ca. D sp. Kalu MAXAC 148	Ca. D. sp. bin 129
actP	Cation/acetate symporter	+	+	+	+	+	+	+	+	+
ackA	Acetate kinase	+	+	+	+	+	+	+	+	−
acsA	Acetyl-coenzyme A synthetase	+	+	+	+	+	+	+	+	+
pta	Phosphate acetyltransferase	+	+	+	+	+	+	+	+	−
satP	Succinate-acetate/proton symporter	+	+	+	+	+	+	+	−	−
yhdW	Putative amino-acid ABC transporter-binding protein	+	+	+	+	−	+	+	+	+
yhdY	Putative amino-acid ABC transporter-binding protein	+	+	+	+	−	+	+	+	+
putP	Sodium/proline symporter	+	+	+	+	+	+	+	+	−
gltS	Sodium/glutamate symporter	+	+	+	+	+	+	+	+	−
sglT	Sodium/glucose cotransporter	+	+	+	+	+	+	+	−	−
glnM	Putative glutamine ABC transporter permease protein	−	−	+	−	−	−	−	+	+
glnH	ABC transporter glutamine-binding protein	−	−	+	−	+	−	−	−	+
ABC.PA.S	Polar amino acid transporter, substrate-binding protein	+	+	+	+	+	+	+	+	+
gntT	H+/gluconate symporter and related permeases	+	−	+	+	+	+	−	−	−
xylE	MFS transporter, SP family, sugar: H+ symporter	+	+	+	+	−	+	−	−	−
gltP	Proton/glutamate-aspartate symporter	−	−	−	−	−	+	−	−	−
fucP	L-fucose-proton symporter	−	−	−	−	−	−	−	+	−
frcA	Fructose import ATP-binding protein FrcA	−	−	−	−	−	−	−	+	−
fruA	Fructose PTS system EIIBC or EIIC component	+	+	−	+	−	+	−	−	−
manX	Mannose PTS system EIIA component	+	+	+	+	+	+	+	+	+
mglA	Galactose/galactoside import ATP-binding protein	−	−	−	−	−	−	−	−	+
urtABCDEa	Urea transport system ATP-binding proteins	+	+	+	+	+	+	+	+	+
amt	Ammonium transporter, Amt family	+	+	+	+	+	+	+	+	+

^aLargely intact across genomes but refer Supplementary Data File 1 for details of missing components.