Table 2.
Annotation of Predicted Genes of Pantoea Phage vB_PagP-SK1
| Genea | CDS position | Strand | Function | Best blast/PHASTER hit | Accession number | E-value |
|---|---|---|---|---|---|---|
| MF01 | 1..172 | 5′ Direct terminal repeat | ||||
| 1 | 928..1401 | (+) | S-adenosyl-l-methionine hydrolase | Klebsiella phage K5 | NC_028800 | 1.50E-42 |
| 2 | 1794..1976 | (+) | gp0.65 | Erwinia phage vB_EamP-L1 | NC_019510 | 1.00E-16 |
| 3 | 2101..3306 | (+) | Protein kinase | Stenotrophomonas phage IME15 | YP_006990206.1 | 4.16E-68 |
| 4 | 3368..6037 | (+) | RNA polymerase | Erwinia phage vB_EamP-L1 | YP_007005430.1 | 0 |
| 5 | 6843..7000 | (+) | Hypothetical head protein | EBPR podovirus 2 | AEI70915.1 | 1.00E+00 |
| 6 | 7070..8083 | (+) | DNA ligase | Erwinia phage vB_EamP-L1 | YP_007005433.1 | 0 |
| MF02 | 8093..8120 | T7 early terminator | ||||
| 7 | 8106..8243 | (+) | Hypothetical phage protein | Citrobacter phage CR8 | CDM21618.1 | 1.20E-01 |
| 8 | 8773..9093 | (+) | gp1.65 | Erwinia phage vB_EamP-L1 | YP_007005436.1 | 6.78E-57 |
| 9 | 9093..9209 | (+) | Hypothetical protein GAP227 28 | Cronobacter phage Dev_CD_23823 | NC_029070 | 5.47E-05 |
| 10 | 9206..9361 | (+) | Bacterial RNAP inhibitor | Erwinia phage vB_EamP-L1 | YP_007005437.1 | 1.12E-17 |
| 11 | 9444..10154 | (+) | ssDNA binding protein | Erwinia phage vB_EamP-L1 | YP_007005438.1 | 2.61E-129 |
| 12 | 10154..10606 | (+) | Endonuclease | Erwinia phage vB_EamP-L1 | YP_007005439.1 | 4.73E-106 |
| 13 | 10606..11055 | (+) | Lysozyme | Erwinia phage vB_EamP-L1 | YP_007005440.1 | 1.41E-106 |
| 14 | 11247..12836 | (+) | DNA primase/helicase | Erwinia phage vB_EamP-L1 | YP_007005441.1 | 0 |
| 15 | 12948..13160 | (+) | gp4.3 | Erwinia phage vB_EamP-L1 | YP_007005444.1 | 3.94E-38 |
| 16 | 13265..13450 | (+) | gp4.5 | Erwinia phage vB_EamP-L1 | YP_007005445.1 | 1.62E-27 |
| 17 | 13504..15630 | (+) | DNA polymerase | Erwinia phage vB_EamP-L1 | YP_007005446.1 | 0 |
| 18 | 15640..15861 | (+) | Hypothetical protein | Cronobacter phage Dev2 | CDM12546.1 | 4.00E-04 |
| 19 | 15851..16171 | (+) | Hypothetical protein gp5.5 | Klebsiella phage vB_KpnP_KpV289 | NC_028977 | 6.71E-30 |
| 20 | 16234..16377 | (+) | gp5.7 | Erwinia phage vB_EamP-L1 | YP_007005448.1 | 7.01E-22 |
| 21 | 16386..16664 | (−) | Hypothetical protein I7C 035c | Pseudomonas phage MR299-2 | AFD10713.1 | 4.70E+00 |
| 22 | 16744..17652 | (+) | Exonuclease | Erwinia phage vB_EamP-L1 | YP_007005450.1 | 0 |
| 23 | 17649..17753 | (+) | gp6.3 | Erwinia phage vB_EamP-L1 | YP_007005451.1 | 5.29E-07 |
| 24 | 17852..18097 | (+) | gp6.5 | Erwinia phage vB_EamP-L1 | YP_007005452.1 | 1.01E-54 |
| 25 | 18102..18338 | (+) | gp6.7 | Erwinia phage vB_EamP-L1 | YP_007005453.1 | 9.26E-50 |
| 26 | 18325..18597 | (+) | gp7.3 | Erwinia phage vB_EamP-L1 | YP_007005454.1 | 1.46E-55 |
| 27 | 18611..20221 | (+) | Head-to-tail joining protein | Erwinia phage vB_EamP-L1 | YP_007005455.1 | 0 |
| 28 | 20273..21238 | (+) | Capsid assembly protein | Erwinia phage vB_EamP-L1 | YP_007005456.1 | 0 |
| 29 | 21423..22463 | (+) | Capsid protein | Erwinia phage vB_EamP-L1 | YP_007005458.1 | 0 |
| 30 | 22481..22588 | (+) | Hypothetical protein | Stenotrophomonas phage IME15 | YP_006990234.1 | 8.00E-06 |
| 31 | 22751..23335 | (+) | Tail tubular protein A | Erwinia phage vB_EamP-L1 | YP_007005459.1 | 4.23E-142 |
| 32 | 23354..25753 | (+) | Tail tubular protein B | Erwinia phage vB_EamP-L1 | YP_007005461.1 | 0 |
| 33 | 25823..26236 | (+) | Tail internal virion protein A | Erwinia phage vB_EamP-L1 | YP_007005462.1 | 4.51E-100 |
| 34 | 26248..26829 | (+) | Tail internal virion protein B | Erwinia phage vB_EamP-L1 | YP_0070705463.1 | 5.20E-135 |
| 35 | 26841..29102 | (+) | Tail internal virion protein C | Erwinia phage vB_EamP-L1 | YP_007005464.1 | 0 |
| 36 | 29117..33115 | (+) | Tail internal virion protein D | Erwinia phage vB_EamP-L1 | YP_007005465.1 | 0 |
| 37 | 33177..35675 | (+) | gp17 tail fiber - EPS depolymerases | Erwinia phage vB_EamP-L1 | YP_007005466.1 | 0 |
| 38 | 35680..35886 | (+) | gp17.5 (type II holin) | Enterobacteria phage BA14 | YP_002003494.1 | 5.10E-33 |
| 39 | 35879..36136 | (+) | Terminase small subunit | Erwinia phage vB_EamP-L1 | YP_007005468.1 | 2.80E-52 |
| 40 | 36239..36703 | (+) | Endopeptidase | Erwinia phage vB_EamP-L1 | YP_007005469.1 | 2.51E-107 |
| 41 | 36705..37385 | (+) | gp18.9 | Erwinia phage vB_EamP-L1 | YP_007005471.1 | 2.94E-152 |
| 42 | 37397..39157 | (+) | Terminase large subunit | Erwinia phage vB_EamP-L1 | YP_007005472.1 | 0 |
| 43 | 39419..39565 | (+) | gp19.5 | Erwinia phage vB_EamP-L1 | YP_007005475.1 | 1.20E-26 |
| MF03 | 39767..39938 | 3′ Direct terminal repeat |
a
MF
MF, miscellaneous feature.