TABLE 2:
Steps for immobilization of MDP compounds
| Step | Biacore 3000 | BI-4500 |
|---|---|---|
| Mount the chip | “Dock”: for docking the chip “Prime”: for equilibrating the system with running buffer PBS at 5 μL/min |
“Startup”: for cleaning the prism stage, mounting the chip, and purging the system with running buffer at 60 μL/min |
| Make a 1:1 EDC/NHS solution | “Dilute”: to mix NHS solution with EDC solution | “Add” and “Stir”: to add NHS solution to EDC-containing vial and mix well |
| Inject EDC/NHS to activate carboxylic acid groups to amine-reactive NHS-esters | “Inject”: pass EDC/NHS solution through the gold chip for 7 minutes | “Inject”: flow 200 μL of EDC/NHS solution over the chip |
| Wash with PBS to remove residual EDC/NHS | “Inject”: add PBS for 2 mins | “Inject”: to inject 200 μL of PBS |
| Coupling reaction between MDP containing an amino group and NHS-esters results in the formation of an amide bond. | “Inject”: flow MDP solution over the chip for 7 minutes | “Inject”: add 200 μL of MDP solution |
| Wash | “Inject”: wash with PBS for 2 minutes | “Inject”: to inject 200 μL of PBS |
| Deactivate unreacted carboxylic acid group with ethanolamine (EA) | “Inject”: flow 1M EA solution over the chip for 7 minutes | “Inject”: inject 200 μL of 1M EA |
| Wash with SDS | “Inject”: flow SDS buffer over the chip for 3 minutes | “Inject”: inject 200 μL of SDS buffer |
| Wash with PBS | “Unclog”: flow PBS buffer over the chip to wash away all residues at a high flow rate | “Inject”: inject 400 μL of PBS |